| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0791 |
|---|
| Symbol | |
|---|
| ID | 3933234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 751819 |
|---|
| End bp | 752328 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637903138 |
|---|
| Product | nuclease (SNase-like) |
|---|
| Protein accession | YP_508733 |
|---|
| Protein GI | 89053282 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAC GGGACAAGGA CGCTCCAGGC AATCCACCTC TGGATCAGTC TTGGCAAAAG
CAAACCAAAC GTCCGAGCCC GCCCGCCCCT TCCGCGCGCC CTGCCCCCTA CAATGCGGGA
CATGTCACGT CGCGCAAGCT GCGTGGGCGT GCCTGGGTGA TAGACGGCGA TACGATTGCC
ATTGATCGGA GCAAGATCCG CCTGGCCGGT ATAGACGCGC CTGAGCTTGA TGAACCCTGG
GGGCAAAAGT CGAAGTGGGC GATGGTGCGT CTGTGTAAAG GGCAAATCAT TACGGCCCAT
TTGACTGGGG AAACCAGCTA TGACCGCGTG GTCGGCACCT GCTACCTGGA CGATGGACGT
GATCTGGCGG CAGAGTTGAT CAAGGCGGGC CTCGCGCTTG ATTTTGCGCA TTTCTCCGGT
GGCAAATACC GGCACCTCGA AACCACGGAT CTGCGCCGGA AACTCAGCGC TGTAAGGCGC
AAGATGCAGG CCACGAAAGT GCTTGATTAG
|
|---|
| Protein sequence | MMKRDKDAPG NPPLDQSWQK QTKRPSPPAP SARPAPYNAG HVTSRKLRGR AWVIDGDTIA
IDRSKIRLAG IDAPELDEPW GQKSKWAMVR LCKGQIITAH LTGETSYDRV VGTCYLDDGR
DLAAELIKAG LALDFAHFSG GKYRHLETTD LRRKLSAVRR KMQATKVLD
|
|---|
| |