| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0783 |
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| Symbol | |
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| ID | 3933226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 744320 |
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| End bp | 745627 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903130 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_508725 |
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| Protein GI | 89053274 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGCGAG GGGCCGTCAG CGCCACTCTG CGGGCCATGT CTGACACCAA ACTTCTGGCC
GCCGTGGCCG CCCGCCGGGA CGCGCTGATT GCGCTGACCC AGGATCTGAT CCGCATTCCC
ACCCTGAACC CACCGGGGCG TAAGTATTGG GAAATCTGCA ATTATCTCGC GACGCGCCTG
AAAGCGCAGG GATTTACGGT CGAGATGATC CGCGCCCATG GGGCCGTCGC CGACAGCGAC
ACCTATCCGC GCTGGAACAT GGTCGCACGG CTGCAGCGGG GGGCCGGCGA GTGCGTGCAT
TTCAACAGCC ACCACGATGT CGTCGCCGTG GGTCATGGCT GGACCCGCGA TCCGTTTGGC
GGAGAGTTGG ACGACGGCAA GATCTACGGG CGCGGGGCCT GTGACATGAA AGGCGGGCTT
GCGGCGTCGA TCATCGCGGC GGAGGCGTTT ATCGAGACCT ATCCGGATTT CAACGGTGTG
ATTGAAATTT CGGCGACAGC AGATGAGGAA TCCGGCGGCT ATGGCGGCGT CGCCTATCTG
GCGGAGCAGG GGTATTTCAG CCCGGACCGC GTGCAGCACG TCATCATCCC CGAGCCGCTC
AACAAGGATC GCATCTGTCT GGGCCATCGC GGCGTCTGGT GGGCGGAGAT CGAGACCCAT
GGCCGCATCG CCCACGGCTC CATGCCCTTC CTCGGCGATT GCGCCGTCCG CCACATGGGG
GCCGTTCTGG AAGAGATGGA GGCGTCGCTG TTCCCGCTTC TGGCCACGAA ACGCACCGAT
ATGCCCGTGG TGCCGGAAGG AGCCAAGCAA TCCACGATGA ACATCAACGC CATCCACGGC
GGAGAGCCGG TGCAGGACGC GGATTACACC GGCCTGCCTG CGGCTTGCGT GCCAGATCGC
TGCAAGATCA CCATCGATCG CCGCTATCTT ATAGAAGAAA ATGAGGGCGA CGTGCGGGCT
GAGATTATCG CTGTGCTGGA GAAGGTCAAA GCCGCCCGGC CCACGTTCCA TTACGAGCTG
AATGAGCTAT GGAGCGTGTC GCCCACCATG ACGGACCGCG ACGCGCCGGT GGTCAGGACG
GTGGAGGCTG CCATCGCCAA GGTGCTGGAA ACGCAGGCTG AATTTGTCGT GTCCCCCGGC
ACTTACGACC AGAAACACAT CGACCGGATC GGCACGTTGA AGAATTGCAT CGCCTACGGG
CCGGGCATCC TTGACCTCGC CCACCAACCC GATGAATGGG TGGGCGTACA GGATATGGAA
GACAGCGCCA AGGTCATGGC GCTGACGCTT GCGGAGCTTC TTTTATAA
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| Protein sequence | MRRGAVSATL RAMSDTKLLA AVAARRDALI ALTQDLIRIP TLNPPGRKYW EICNYLATRL
KAQGFTVEMI RAHGAVADSD TYPRWNMVAR LQRGAGECVH FNSHHDVVAV GHGWTRDPFG
GELDDGKIYG RGACDMKGGL AASIIAAEAF IETYPDFNGV IEISATADEE SGGYGGVAYL
AEQGYFSPDR VQHVIIPEPL NKDRICLGHR GVWWAEIETH GRIAHGSMPF LGDCAVRHMG
AVLEEMEASL FPLLATKRTD MPVVPEGAKQ STMNINAIHG GEPVQDADYT GLPAACVPDR
CKITIDRRYL IEENEGDVRA EIIAVLEKVK AARPTFHYEL NELWSVSPTM TDRDAPVVRT
VEAAIAKVLE TQAEFVVSPG TYDQKHIDRI GTLKNCIAYG PGILDLAHQP DEWVGVQDME
DSAKVMALTL AELLL
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