| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0782 |
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| Symbol | |
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| ID | 3933225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 742293 |
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| End bp | 743777 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903129 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_508724 |
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| Protein GI | 89053273 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.319175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCA CCCCCCTATC GACATTGCGC CTGAGCGCCG CCGTGTTGGC GCTGACAGCG
GGCGCTGCAA TGGCGCAGCA GACATCGATC ACCATCGGAA TGCAGCTGGA GCCGCCGATG
CTGGACCCCA CGGGCGGGGC TGCGGCGGCG ATTGACGAGG TCGTCTATTC CAACGTGTTC
GAGGGGCTGA CGCGCTTTGC CGCCGATGGG TCCGTCGTTC CCGGGCTGGC GGAGTCGTGG
GAGATTTCCG AAGACGGCAC CGTTTATACC TTCACCTTGC GGGACGGCGT CACCTTCCAT
GACGGGGCTG CGATGACCGC CGAGGATGTT GTGTTCAGCC TCGACCGTGC ACGCGCCGAA
GGCTCCACCA ACGCGCAGGC GGCGCTGTTT GCCAATATCG TCAGCGTCGA GGCCGTGGAT
GACACCACCG CCGTGGTCAC GCTGGACGGG CCCGACGGCG CGTTCCTGTT CGACATGGCC
TGGGGCGACG CGGTGATCGT GGACGCGGCC AGCGCGGAGA ATAACGCCAC AAACCCCATT
GGTACCGGCG CGTTTGCGTT CAGCGAATGG CGGCAGGGCG ACAGCGTGAT GCTGACCCGC
AACGACAATT ACTGGGGCGA GCCCGCCGCG CTGACGGACG TGACCTTCCG CTTCATCAGT
GACCCCAACG CGGCGCTCGC GGCGATGATG GCGGGCGATG TGGATGCCTT CCCGGTCTTC
CCCGCCCCTG AAAACCTTGC GCAGTTCGAG GCCGACCCCC GGTTCAACGT CATCGTCGGC
TCCACCGAGG GGGAAACCAT TCTGGCGATG AACAACGAGG CGGAGGCGCT GGCCGATCCG
CTGGTGCGGC AGGCGATCAC CCATGCGATC AACCGCCAAG ACATCATCGA CGGCGCGATG
TTTGGCTATG GCACGCCCAT CGGCACCCAC TTCGCGCCGC ACAATCCCGA TTACGTGGAC
CTGACGGGGC AATCGGCGTT TGACCCGGAC CGGGCGCGCG AATTGCTGGC CGAGGCGGGT
GCGGAGGACC TGACCCTGCG CCTGATGCTG CCACCGCCGT CCTATGCGCG GCGCGGCGGG
GAAATCATCG CCAGCCAGTT GCGGGACGTC GGCATCGCCA CGGAAATCAC CAATCTGGAA
TGGGCCGGAT GGCTGGAACA GGTGTTCCGC GGCTATGATT TCGACCTGAC GATTGTCAGC
CATACGGAAC CTGCGGACAT CAACATCTAC GCCCGGCCGG AGTATTATTT CCAATACGAC
AATGCGGAGT TTCAGGGCCT GATGGAGGAT TTGTCGGTCA CCACCGACCC GGCTGAACGC
ACGGCGATCA ACCAGCAGGC CCAACAGATG ATCGCCGATG ATTACGTCAA CGCCTATCTC
TTCCAGCTGG CCAAGACCGG TGTCGCCAAC GCGGGCATTG AGGGTCTGTG GGAAAACGCG
CCGACCCAGG CCAATGACCT GACGGCGGTG CGCTGGACGC AGTAG
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| Protein sequence | MTSTPLSTLR LSAAVLALTA GAAMAQQTSI TIGMQLEPPM LDPTGGAAAA IDEVVYSNVF
EGLTRFAADG SVVPGLAESW EISEDGTVYT FTLRDGVTFH DGAAMTAEDV VFSLDRARAE
GSTNAQAALF ANIVSVEAVD DTTAVVTLDG PDGAFLFDMA WGDAVIVDAA SAENNATNPI
GTGAFAFSEW RQGDSVMLTR NDNYWGEPAA LTDVTFRFIS DPNAALAAMM AGDVDAFPVF
PAPENLAQFE ADPRFNVIVG STEGETILAM NNEAEALADP LVRQAITHAI NRQDIIDGAM
FGYGTPIGTH FAPHNPDYVD LTGQSAFDPD RARELLAEAG AEDLTLRLML PPPSYARRGG
EIIASQLRDV GIATEITNLE WAGWLEQVFR GYDFDLTIVS HTEPADINIY ARPEYYFQYD
NAEFQGLMED LSVTTDPAER TAINQQAQQM IADDYVNAYL FQLAKTGVAN AGIEGLWENA
PTQANDLTAV RWTQ
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