| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0749 |
|---|
| Symbol | rpsP |
|---|
| ID | 3933192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 717028 |
|---|
| End bp | 717420 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637903096 |
|---|
| Product | 30S ribosomal protein S16 |
|---|
| Protein accession | YP_508691 |
|---|
| Protein GI | 89053240 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATGA AAATTCGTCT CGCCCGCGGC GGTTCCAAGA AACGTCCGTT TTACCGCATT
GTCGCCTCCG ACAGCCGCAT GCCCCGCGAT GGCCGCTTCA TCGAAAAGCT CGGCACCTAC
AACCCGCTCC TGCCCAAGGA CAGCGAAGAT CGCGTGAAGA TGGATATGGA GCGCGTGCAG
CACTGGCTCG ATCAGGGCGC ACAGCCCACC GACCGGATCA GCCGCTTCCT GGAAGCCGCA
GGCCATACGC CCAAGAAAGA GCGGGCCAAC ATGAAGAAGG CGCAGCCCGG CAAGAAAGCC
GTGGAGCGGG CGGAAGAGAA AGCCGCAAAG GCATCCGCCG CCGCTGAAGC CCCGGCAGAA
GCACCCGCAG CCGAGGCCGC CGCTGAGGAA TAA
|
|---|
| Protein sequence | MAMKIRLARG GSKKRPFYRI VASDSRMPRD GRFIEKLGTY NPLLPKDSED RVKMDMERVQ
HWLDQGAQPT DRISRFLEAA GHTPKKERAN MKKAQPGKKA VERAEEKAAK ASAAAEAPAE
APAAEAAAEE
|
|---|
| |