Gene Jann_0698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0698 
Symbol 
ID3933141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp671646 
End bp672233 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content64% 
IMG OID637903045 
ProductOmpA/MotB 
Protein accessionYP_508640 
Protein GI89053189 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.1277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAACG CTCTGACACG CGGTTTGGCG CGGGTATTTG CGGGCTCGCT TGGCATGACT 
GCTCTTGGTG TGGGGGCGTT TGTGGTCACC GCGACACCGG CGGCAGCTCA ACAGCAAATC
ATCATAACGG GACAGGTCCA GCCGGGTCTT TGGGTGGACC CCGACGGGTG CCTGCACTGG
GTCGCGGATG GCGGGATCGA GGGCTATATG GAAGGCCGCG TGAACCCCGA GAACGGGATG
CCGGTCTGCC TGGATGTGAA CCCCTGCGGC GTCGCGAATA CCGATACGAT GTTCCAGTCC
GGCAGCGCCC GTCTGACCGG CTCGGGCCGT CAGTATCTGC AACAGTTCTT TGCCGGGGCA
GGGGCTTATG CCTACGCCAT CTATGGCCAT ACCGACAGCC GCGCCTCGGA CGAATACAAC
ATGCGTCTGA GTGAGCGGCG GGCCGCTGCC GTGGCCAATG TCGCCCGCTC CGTAGGCGCG
CGGGTCGCCC GTGAAATCGG TTACGGGGAA CGGCGTCCGG TCGCCCCCAA CGACTCGGCT
GCGAACATGC AGCGCAATCG CCGCGTCGAA ATCGTGTGCT ACCGCTGA
 
Protein sequence
MINALTRGLA RVFAGSLGMT ALGVGAFVVT ATPAAAQQQI IITGQVQPGL WVDPDGCLHW 
VADGGIEGYM EGRVNPENGM PVCLDVNPCG VANTDTMFQS GSARLTGSGR QYLQQFFAGA
GAYAYAIYGH TDSRASDEYN MRLSERRAAA VANVARSVGA RVAREIGYGE RRPVAPNDSA
ANMQRNRRVE IVCYR