Gene Jann_0697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0697 
Symbol 
ID3933140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp669900 
End bp671288 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content62% 
IMG OID637903044 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_508639 
Protein GI89053188 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.224906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGAAG TAAGCGCGGT CGCAGGCTAC ACCCCATCCG TTGAGATTTC CCTGACCCCG 
CGCGAGGCGC CCCAGATGAC CAAAAAGCTC TTTGTGAAGA CCTATGGCTG TCAGATGAAC
GTCTACGACA GTGAGCGTAT GGCCGAGGCC TTGGGCGGCG AGGGATACGA GCAGGTGAAC
ACGCCCGAAG GGGCGGATAT GATCCTGCTC AACACCTGCC ATATCCGTGA AAAGGCTGCG
GAAAAGATGT ATTCTGAACT GGGGCGGTTG CGGCCCTTGC GCGATGCCAA CCCGGATTTG
AAGATCGGCG TGGCGGGCTG TGTGGCGCAG GCGGAGGGTG AGGAAATCAT GCGCCGTCAG
CCGCTTGTGG ACCTTGTTGT GGGGCCTCAG ACGTACCACC GCCTGCCGAA GATGATGGAG
GCGGTGAACG CCGGTGAAAA GGCGCTCGAC ACGGATTTCC CTGAGGAAGA CAAGTTCCTG
AACCTGCCCA AGGCGCGCGC CACGCGCGGC CCCACCGCGT TCCTGACGGT GCAGGAGGGC
TGCGATAAAT TCTGCGCCTT CTGTGTGGTG CCCTATACGC GCGGCGCGGA GGTCTCCCGG
TCCGCTGAGC GGTTGATGGC CGAAGCCCGC GATCTGGTGG ACCGGGGTGT CCGAGAGATC
ACGCTGCTGG GGCAGAATGT GAATGCCTAT CACGGGGCGG GGGATGGCGG GACCTGGGGG
CTTGCACGCC TGATCCGCGA GATGGCGAAG ATCGACGGGC TAGACCGTAT CCGCTTCACG
ACCTCCCACC CCAACGATAT GGAAGACGAC CTGATCGCGG CCCATGGCGA TTGCCCGGAA
CTGATGCCGT ATCTCCACCT TCCCGTGCAG GCCGGATCAG ACAAAATCCT CAAGGCGATG
AACCGCAAGC ACACGGCGGC GGACTACATT CGTCTGATCG ACCGCATTCG GGATGCCCGC
CCGGATCTGC ACCTGTCGGG TGATTTCATC GTCGGCTTCC CCGGCGAGAC GGAGGAGGAT
TTTCAGGCGA CCCTCGATCT GGTGGAAACG GTCGGCTACG GCACGGCCTA TTCGTTCAAA
TACTCCGCCC GGCCCGGGAC CCCTGCGGCG GAACGGACGG GTCAGGTGAG CGAGGCCGAG
GCCAGTGACC GTTTGCAGCG CCTGCAAGCG CTGCTGACCC AACAGCAACG CGCGGCGCAA
GATGCAATGG TCGGGCGGCG CGTGAAGGTG CTGTTTGAGA AGCCGGGCCG CAACCCGGGA
CAGATGATCG GGAAGTCCGA GTACCTGCAT TCGGTGCACG TGGATGGGCC GGACACTCTG
CGCGGTCAGA TTGCCGAGGT CGAGATCGCT GAAAGTAAAA CGAACTCTCT CACCGGTCGG
CTGGTGTAA
 
Protein sequence
MIEVSAVAGY TPSVEISLTP REAPQMTKKL FVKTYGCQMN VYDSERMAEA LGGEGYEQVN 
TPEGADMILL NTCHIREKAA EKMYSELGRL RPLRDANPDL KIGVAGCVAQ AEGEEIMRRQ
PLVDLVVGPQ TYHRLPKMME AVNAGEKALD TDFPEEDKFL NLPKARATRG PTAFLTVQEG
CDKFCAFCVV PYTRGAEVSR SAERLMAEAR DLVDRGVREI TLLGQNVNAY HGAGDGGTWG
LARLIREMAK IDGLDRIRFT TSHPNDMEDD LIAAHGDCPE LMPYLHLPVQ AGSDKILKAM
NRKHTAADYI RLIDRIRDAR PDLHLSGDFI VGFPGETEED FQATLDLVET VGYGTAYSFK
YSARPGTPAA ERTGQVSEAE ASDRLQRLQA LLTQQQRAAQ DAMVGRRVKV LFEKPGRNPG
QMIGKSEYLH SVHVDGPDTL RGQIAEVEIA ESKTNSLTGR LV