| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0675 |
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| Symbol | |
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| ID | 3933118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 646538 |
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| End bp | 647431 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903022 |
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| Product | anaerobic benzoate catabolism transcriptional regulator |
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| Protein accession | YP_508617 |
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| Protein GI | 89053166 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.514504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.529847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCG AAGACCGCCA TCCCCCCGTT GCCATTGATG CCGCCATCCT GGCGCTTCAG
GCCCGTGTCG GGGACCGGGT CCGGGCGGCG CGGGCGTCCA AGCGCATATC CCGGCGGGTG
TTATCTGAAA CCTCGGGCGT CTCGCCGCGC TATCTGGCGC AGTTGGAAGG CGGCGACGGC
AATATCTCCA TCGGACTCCT GTTCCGCGTT GCAGACGCCC TGGACGTGTC GCTGGAAGCG
CTCGTCTCCG CCTGCGATCT GCCCGCCGAC GCCCGCCGCG TGGGACAGGC TTTTGCAGAC
GCGGACCCGG TAATACAGGC CCGCGTGCGG GACCTGTTGT CAGAGACCAC CTCAAGGGAC
AGCCGCCTGT GCCTGATCGG CCTGCGCGGG GCGGGGAAAT CCACCCTCGG CGCTGCGGCG
GCCAAAGCGC TGGACGTGCC CTTCATCGAG CTGAACCGCG CCATTGAAGC CGCGGGAAGT
ATGCCGATTG CCGAGATCAT GGCGCTATAC GGCGCTGAAG GGTATCGCCA GTTGGAGGCC
GACGCGCTGG ATAAGATCGT CGCCGAACAG GATCGCGCGA TTGTGGCCGT GGCGGGCGGC
ATCGTGGGCG AGGCGAAGAC ATTCGACCGC CTGCTGGATC GCTTCCACAC CGTTTGGGTG
AAAACCTCCC CCGAAGAACA TATGTCCCGC GTCCGAGCCC AGGGCGACAC ACGGCCCATG
GAGGGGAACC CGCAAGCCAT GGCGCAGTTG CGGCTGATCC TGACCAGCCG GGAGGCCGAT
TACAGCCGCG CCAATGCGGT GCTCGATACC GGCGGGCAAA GCGTCGATGC CTCGCTCGCG
GGGTTGCTGT CACTGATCGA GCATCACAAT TTCATAACAA AGGACCTGCC ATGA
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| Protein sequence | MSSEDRHPPV AIDAAILALQ ARVGDRVRAA RASKRISRRV LSETSGVSPR YLAQLEGGDG
NISIGLLFRV ADALDVSLEA LVSACDLPAD ARRVGQAFAD ADPVIQARVR DLLSETTSRD
SRLCLIGLRG AGKSTLGAAA AKALDVPFIE LNRAIEAAGS MPIAEIMALY GAEGYRQLEA
DALDKIVAEQ DRAIVAVAGG IVGEAKTFDR LLDRFHTVWV KTSPEEHMSR VRAQGDTRPM
EGNPQAMAQL RLILTSREAD YSRANAVLDT GGQSVDASLA GLLSLIEHHN FITKDLP
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