| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0674 |
|---|
| Symbol | |
|---|
| ID | 3933117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 646103 |
|---|
| End bp | 646534 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637903021 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_508616 |
|---|
| Protein GI | 89053165 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.977141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.712036 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCGC GCCCCGACAG CGCTTTTGTC CACGACGTCC GCGTCACATG GGGCGACTGT
GACCCGGCCA AGATCGCCTA TACGGGCCAC CTGCCTCGGT TCGCGCTTGA GGCCATAGAT
GCGTGGTGGT CTGAATATCA CGGGCCCGGC GGTTGGTATC ATCTGGAATT GGACACCAAT
GTCGGCACGC CCTTCGTGCG GCTGGAAATG GACTTCAAAT CCCCCGTCAC GCCCCGCCAT
ATCCTGAAGT GCCACACCTG GCCGACCAGG TTGGGCACCA AGTCGATCAC CTTTCGTGTC
GACGGTGTCC AGGACGGTGT GACCTGCTTT GTAGGCGCGT TCACGTGTGT CTTCACCATC
GCCGATCAAT TCAAATCCCA GCCCGCGCCG GACCATCTGC GCGCGTTGAT CGAACCCCAT
ATTCCGGCCT GA
|
|---|
| Protein sequence | MQPRPDSAFV HDVRVTWGDC DPAKIAYTGH LPRFALEAID AWWSEYHGPG GWYHLELDTN
VGTPFVRLEM DFKSPVTPRH ILKCHTWPTR LGTKSITFRV DGVQDGVTCF VGAFTCVFTI
ADQFKSQPAP DHLRALIEPH IPA
|
|---|
| |