| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0666 |
|---|
| Symbol | |
|---|
| ID | 3933109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 636544 |
|---|
| End bp | 637053 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637903013 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_508608 |
|---|
| Protein GI | 89053157 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.10715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAAAAG AGCGCCCCGG TTTGGCTGAT CGTGACGCGG ATCTGCGGGC TCTGGTGAGC
TACAACGTGA AGCGGGCGAA TTCGGCCCTG ATGGGGGATG TGGAACGCCT AGTGGGGCGG
TTCGGCTTGC GGCGTACCAC GTTTTCGGCG CTGTCGGTGA TCGCGGCCAA TGGCGGCATA
AGGCAATCGG ATGTGGCGGA GGTGCTGGCC ATTGAACGGC CCAATCTGGT GCAGATCCTT
GATGAGGTGC AACGCGCGGG ATGGATCGAA CGGGTGCGGG ACGGGGCGGA CAAACGGGTC
TATCTGCTGA ACGCCACGCC TGCCGGATTG GCCCGCCTGG CGGAGGCTGA CGCGGTTCTG
CGCGCCTATG ATGCCCGGCT GACGCGGGGG ATGAGTGATG CGGAGCGGGC GACGTTGATC
GCCGCGTTGC GGCGCGTGGA GGAGAGTGGG GAAGAGGCTT GGGAGGGCCT GCAGAGTGAG
CCGGAGATCG AGGACGTATC AACCACATGA
|
|---|
| Protein sequence | MRKERPGLAD RDADLRALVS YNVKRANSAL MGDVERLVGR FGLRRTTFSA LSVIAANGGI
RQSDVAEVLA IERPNLVQIL DEVQRAGWIE RVRDGADKRV YLLNATPAGL ARLAEADAVL
RAYDARLTRG MSDAERATLI AALRRVEESG EEAWEGLQSE PEIEDVSTT
|
|---|
| |