| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0661 |
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| Symbol | |
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| ID | 3933104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 631686 |
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| End bp | 632711 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903008 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_508603 |
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| Protein GI | 89053152 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00759751 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA AACTTTTGAT GACGACAGTC GCGGCAGGCG CGATGGTGGC CTCGGGCGCA
TTGGCGCAGG AGGTGACGCT GCGCCTGCAC CAGTTCCTGC CTGCGCAAGC CAATGTGCCC
GCGCTGGTGC TGGACGTGTG GGCCGATCAG GTTGAGGAAG CCTCTGGCGG ACGCATCGAG
ATCGAGCGCT ATCCGTCGAT GCAGCTGGGC GGCTCGCCGC CAGAACTGAT GGATCAGGCC
GTGGATGGCG TGGCCGATAT CGTCTGGACC GTGGTCGGCT ACACGCCGGG CCGCTTCCCG
AGCACTGAAG TGTTCGAGCT GCCGTTCATG GTCGCTGATG CCCGCGCCGC GTCCTGCGCC
TATTGGACGA TGTATGAAGA GGGGATGCAG GAGGAATTCT CCTCCGTGCA CCTGCTGGGC
ACCTGGGTCC ACGGGCCGGG CATGTTCCAC ACGGCGGATC CGGTTGAGGT TCCAAGCGAC
CTTGAGGGGA TGCAGATCCG CGGCGGATCG CGGCTTGTGA ACCAGTTGCT GGAGCTGACA
GGCGCCACGC CCGTGGGCAT GCCCGTTCCC GCCGTGCCGG AAGCGCTGTC GCGTGGCACG
ATTGACGGCA CCACGATCCC GTGGGAAGTC ACAGCCGCCC TGCGCGTGCC GGAACTGGTG
GAAAACCACA CCGGGTTCGA GGGCAATGGG CTGTATACGC TGACCTTCGT GCTGGCGATG
AACAACGATG CCTACGACGC GATGCCAGAG GATCTGCAAC AGATCCTGGA CGACAATTCT
GGTCTGGAAT TCTCCATCTT CGCGGGTGGC ACCCAGGCCG ACGCCGATGG TCCGGCGCGC
GAGCTGGCGG TGGATGCGGG CAACAACATC ATCATGATCG ACGCGGCCAC GGCCGAGGCC
GAATGGCTGC CGGTTGTGGG CCCGATCTAC GACACGTGGA TCGCGGATGT TGCCGAAAGT
GGGCTGGACG GCCAGGCGCT GATCGACCGG GCGCGGGAGC TGATGTCCGG GCAATGCGCG
GGCTGA
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| Protein sequence | MKTKLLMTTV AAGAMVASGA LAQEVTLRLH QFLPAQANVP ALVLDVWADQ VEEASGGRIE
IERYPSMQLG GSPPELMDQA VDGVADIVWT VVGYTPGRFP STEVFELPFM VADARAASCA
YWTMYEEGMQ EEFSSVHLLG TWVHGPGMFH TADPVEVPSD LEGMQIRGGS RLVNQLLELT
GATPVGMPVP AVPEALSRGT IDGTTIPWEV TAALRVPELV ENHTGFEGNG LYTLTFVLAM
NNDAYDAMPE DLQQILDDNS GLEFSIFAGG TQADADGPAR ELAVDAGNNI IMIDAATAEA
EWLPVVGPIY DTWIADVAES GLDGQALIDR ARELMSGQCA G
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