| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0648 |
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| Symbol | |
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| ID | 3933091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 619601 |
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| End bp | 620143 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902995 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_508590 |
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| Protein GI | 89053139 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.739636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGGAC CAGACCATAT CGAAGGCCTC ATCCTGCAGG TGTCCCTGGG CAACAGAGAC
GCGTTCTCGG ACCTGTACGA CGCCACGAGC GGCAAGCTGT TCAGCATATG TCTGAAGGTC
CTCAAGAACA GGTCCGAGGC CGAGGATGCA TTGCAAGATG CCTATATGCG CATCTGGAAC
AAGGCCGACC ACTACGCGGT GACGGGGCAT TCGCCGATGA CATGGCTGAT CACGCTCACG
CGGAACCTCG CGATTGACCG CCTGCGCAAG CGCCGCGCCG TGGAGGTGGA TCTGGACGAG
GTGGGCGATA TCACCGAAAG CCGCCCCGGG CCGGAAGCCG CCGCCATTGC CGCGTCCGAG
GCCGGGCGCA TCCGTGCCTG CCTGGAGGAG CTTCCCGGCG ACCGCGCAGC CGCCGTGCGC
GCCGCATATC TGGAAGGGGC CGCGTATAAA GACCTCGCCA GGCATCATGA CGTCCCGCTG
AACACGATGC GCACCTGGCT GCGCCGCAGC TTGCTGAGTT TGAAGGAGTG TCTTTCGCGA
TGA
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| Protein sequence | MTGPDHIEGL ILQVSLGNRD AFSDLYDATS GKLFSICLKV LKNRSEAEDA LQDAYMRIWN
KADHYAVTGH SPMTWLITLT RNLAIDRLRK RRAVEVDLDE VGDITESRPG PEAAAIAASE
AGRIRACLEE LPGDRAAAVR AAYLEGAAYK DLARHHDVPL NTMRTWLRRS LLSLKECLSR
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