| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0637 |
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| Symbol | |
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| ID | 3933079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 608514 |
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| End bp | 610394 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902983 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_508579 |
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| Protein GI | 89053128 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC AGAACAGAAA CCTGATCCTG GCCACCGGCC TGAGCTTTGT TGTCATCCTC
GTATGGTTCC TCCTGTTCCC GCCGCCAGAA ATGGTGGAAG ATCCCAATGC CATCCCCCCC
GCGGCTGAAA CCGGCGGCGT CGAAACCGAT ACCGGTATCG CGTTGACCCC GCCTGTCACC
GTCGCTGATG CGCCTGCGGG TGCGGACACC ACGGCGCCGA GCGAGGTTGC GCTGTCGGAG
GCTGCGCGCA TCGACATCGA CACACCGGCG GTTGAGGGAT CCATCTCGCT CCTGGGGGGC
CGCATCGACG ATCTGTCGCT GCGCAACTAC TTCACCGAAG TGGACGGCGA CCAGATCGTC
CGCCTCCTCT CGCCCGTGGG CTCCGATGAC CCCTATTACG CGCTCTACGG CTGGACCCCA
TCGGGGGATC TCGGTTACGC GGATGTGCCG ACGTCCGACA CGCCGTGGGA ACTTGAATCC
GGCACAATTC TCACGCCCGA CAGCCCCATC ACGCTGGCCT GGGACAACGG ATCTGGCCTG
ATCTTCCGCC GCACGATCGA GATTGATGAC CGCTTCATGT TCCAGGTCAC GCAATCGGTC
GAAAATACCG GCGGCGCGGA GGTCAACCTG GCCCCCTACG GCATCGTGGC CCGTCACGGC
CTGCCCTCGG ATCTACAGAA CTTCTTCATC CTGCACGAAG GCGTCGTTCG CAAAGTCGAC
GGAGAGCTGA GCGAGTTGGG CTACAGCGAC CTTCCCGACC TGGACATCAT CGCGCGCGAA
GGCGTCCCGG CGGAGGTGAT GGAGGTCGAG ACCAACGGCT GGATCGGCTT CACCGACAAA
TACTGGATGA CCACCCTGAT CCCGGGCGAG AACCAATCCT TCGTGTCAGT CGTCAAATAC
GTCCCCTCCG CCGAGATCTA CCAGACCGAA GCGCGCCTGC CCTACATGTC CATCGCACCC
GGTGAAACGG CCGAGGTCAC GACGCAGCTG TTCGCCGGTG CGAAAGAAGC CGAGGCGATC
CGCGACTATG AAAACGCAGA ACCCGGCCTG ATCGCGAGCC TTTTTGGCGC CGAACAAGAC
GCCAGCCGCG GTGAGATCCC GCGCTTCATC GACAGCATCG ACTGGGGGTG GTTCTACTTC
CTCACCAAGC CGCTGTTCTG GCTTCTGCAT TGGCTGAACG GTGCCATCGG CAATATGGGT
CTCGCGATCA TCTCGCTCAC CCTGATCGTG AAGGCCGTGC TCTTCCCGCT GGCCTACCGC
TCCTATGTGT CGATGGCGAA GATGAAAGAG CTTCAGCCAG AGATCGAGAA GCTGAAAGAA
AGCGCGGGCG ATGATCGCCA AAAGCTCCAG CAGGGCATGA TGGAGCTGTA CAAGAAGAAC
AAGGTGAACC CGGCGGGCGG CTGTTTGCCG ATCCTGTTGC AGATCCCGAT CTTCTTCTCG
CTCTACAAAG TGATTTTCGT CACGCTGGAG CTGCGCCACG CGCCGTTCTT CGGCTGGCTC
AATGACCTCA GCGCCCCCGA CAGCTCCTCG ATCATCAACC TCTACGGCCT GCTACCCAAC
CCGGCGCCCG AGCCCGAATC GATCATGGCG CTGATCTTCA TCGGCATTCT GCCCCTGCTT
CTGGGCATCT CCATGTGGTT GCAGCAAAAG CTGAACCCGG CCCCAACGGA CGCGATGCAG
GCGCAGATCT TCGCCTGGCT GCCCTGGGTC TTCATGTTCA TGTTGGGCAG CTTCGCCTCC
GGCCTTCTTG TCTACTGGAT TGCCAACAAC ACGCTGACCT TCACACAGCA ATACCTGATC
ATGCGCAGTC AGGGCTTTAA GCCCGACGTG TTCGGTAACA TTCGCAGCAG CTTCAAGAAG
AAGGCCAAGG AAGAGAAATG A
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| Protein sequence | MDDQNRNLIL ATGLSFVVIL VWFLLFPPPE MVEDPNAIPP AAETGGVETD TGIALTPPVT
VADAPAGADT TAPSEVALSE AARIDIDTPA VEGSISLLGG RIDDLSLRNY FTEVDGDQIV
RLLSPVGSDD PYYALYGWTP SGDLGYADVP TSDTPWELES GTILTPDSPI TLAWDNGSGL
IFRRTIEIDD RFMFQVTQSV ENTGGAEVNL APYGIVARHG LPSDLQNFFI LHEGVVRKVD
GELSELGYSD LPDLDIIARE GVPAEVMEVE TNGWIGFTDK YWMTTLIPGE NQSFVSVVKY
VPSAEIYQTE ARLPYMSIAP GETAEVTTQL FAGAKEAEAI RDYENAEPGL IASLFGAEQD
ASRGEIPRFI DSIDWGWFYF LTKPLFWLLH WLNGAIGNMG LAIISLTLIV KAVLFPLAYR
SYVSMAKMKE LQPEIEKLKE SAGDDRQKLQ QGMMELYKKN KVNPAGGCLP ILLQIPIFFS
LYKVIFVTLE LRHAPFFGWL NDLSAPDSSS IINLYGLLPN PAPEPESIMA LIFIGILPLL
LGISMWLQQK LNPAPTDAMQ AQIFAWLPWV FMFMLGSFAS GLLVYWIANN TLTFTQQYLI
MRSQGFKPDV FGNIRSSFKK KAKEEK
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