| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0629 |
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| Symbol | |
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| ID | 3933071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 601894 |
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| End bp | 603231 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902975 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_508571 |
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| Protein GI | 89053120 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA TGCACTCTGA AACCAGCGTT CACACCGCTT ACGTCCGGAC CGAGATGTTG
CCGGAGCAGA CGCCTCCGGT GGCGGTGGCA GGTCCCGTGA AGTGGGTCCG CGAGAACCTG
TTCTCGTCCG TCCCCAACGC GCTGATGACC CTTGTGTCGA TCTATGTCGT CTACGTGGTC
CTGGCCGGTA TTCTGCCATG GATGATCAAC GGCATCTGGG ATGCCGACTC CCTGAGTGAG
TGTCGTGAGA TCCGTGATGC GCGCTTTGGC CCAAGCGACG GGCATGGTGG CGGCGTGGCC
TGTTGGGCCG TGCTTGTCGA CCGGTGGGAC CAGCTGATGT TCGGCTTCTA CCCGCCGGAG
CTGTACTGGC GCGCAATTCT GGCCTTCGCG CTGTTCCTGG GCGCGATTGC CCCGGTCCTC
TACGACACCC TGCCGCGCAA ACTTCTGCTT CTGACGGCGG CGATGCCGTT CCTGTGCGCG
TGGCTTTTGT GGGGCGGCTC GATCTGGACG CCTCTTCTGG TGGCTGCTGG CTTCGGGCTC
GGATACGCCG TAATCAAGTT CGGCTCCGTC GCCTTGGGGG CGATGACCTC CACGATCCTG
GCGATTGTGG TGCCCCTCCT CTACTGGCTG TTCCTGTTGG GACCGCTTGT CAGCGTCATG
GACAGCATCC TGCCCATCGG GATCCAGGCC GTGCAGTCCC GTGAATTCGG CGGCTTCCTT
CTGGCATTTG TCATCGGCGC GTCGGGGATC ATCCTGTCGA TGCCCCTTGG CGTCATGCTG
GCTTTGGGCC GTCAGTCGGA CCTGTTCATC ATCAACAAGT TCTCCGTCAT CTTCATCGAG
GTGATCCGGG GCGTGCCGCT GATCGTGTGG CTGTTCACCG CGCAGCTTTT GCTGGGGTAC
TTCCTGCCGC CGGGGACGAA TTTTGATCTG ATGGTGCGGG TGATCATCAT GGTGACGCTC
TTCTCTGCCG CCTACATTGC CGAGGTGATC CGGGGCGGCC TCGCGGCCCT GCCGCGGGGA
CAGTATGAGG GAGCCGACAG TCTGGGCCTC AATTACTGGC AGTCCATGCA GTTGATCGTC
CTGCCCCAGG CCCTGAAAAT CTCGATCCCC GGGATCGTGT CGTCGTTCAT CGGCCTCTTC
AAGGACACCA CGCTGGTGGT CTTCATCGGC CTCTTCGACC CAATCGGCTT CTCGAACGCG
ATCCGCGCCG ATACCGACTG GAACGGCATC TACTGGGAAC TCTTCATCTT TATCGGGCTC
TGCTTCTTCA TCTGTTGCTT CGGCATGTCC CGTTATTCGC AATGGCTTGA GCGCAAGCTG
GCCACCGACC ACCGTTAA
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| Protein sequence | MSEMHSETSV HTAYVRTEML PEQTPPVAVA GPVKWVRENL FSSVPNALMT LVSIYVVYVV
LAGILPWMIN GIWDADSLSE CREIRDARFG PSDGHGGGVA CWAVLVDRWD QLMFGFYPPE
LYWRAILAFA LFLGAIAPVL YDTLPRKLLL LTAAMPFLCA WLLWGGSIWT PLLVAAGFGL
GYAVIKFGSV ALGAMTSTIL AIVVPLLYWL FLLGPLVSVM DSILPIGIQA VQSREFGGFL
LAFVIGASGI ILSMPLGVML ALGRQSDLFI INKFSVIFIE VIRGVPLIVW LFTAQLLLGY
FLPPGTNFDL MVRVIIMVTL FSAAYIAEVI RGGLAALPRG QYEGADSLGL NYWQSMQLIV
LPQALKISIP GIVSSFIGLF KDTTLVVFIG LFDPIGFSNA IRADTDWNGI YWELFIFIGL
CFFICCFGMS RYSQWLERKL ATDHR
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