| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0628 |
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| Symbol | |
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| ID | 3933070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 600603 |
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| End bp | 601892 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902974 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_508570 |
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| Protein GI | 89053119 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.608852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGA TGACCGATCC GCCACGGGAG GCGTTTCGAC TAAGCCAACT TATCTACGAC
ACACGGTATC GGTCGATGAC GATCCAGGTT GTGGCGTTCA TATTGATTAT GCTTGGTCTG
TGGTATTTGG GCAGAAATGC CATCCAGAAC CTCTCGGACC TGGGCAAAGA TTTTGACTTT
GGCTTTCTGG GCAACCGCGC GGGTTATGAC ATCAACCAGC GCCTGATCGA GTATTCCAAC
GACAGCACCC ATGGTCGCGC GGCGATTGTC GGCATCCTCA ACACCCTTCT TGTGGCCTTT
CTGGGCTGTA TCACCGCCAC GATCCTGGGC GTTGCAGCGG GCGTCCTGCG TCTGTCGAAC
AACTGGATCG TCGGGCGTTT GATGACCGTC TATGTCGAAG GCTTCCGCAA CATTCCGCTG
CTGCTTTGGA TCATCGTGAT CTTTGCGATC ATGACCGAAG CCATGCCGCA ACCCCGCGAT
TTCCGCGGCG ACAACCCCGA GGCGAGCATG TCGCTTGGTG GCAGCGTCGC CGTGACCAAC
CGGGGCGTTT ATATTCCCAA CGTGGTCTTC ACCCGGTCCC TTGGTGGCAA TGAGATGTCG
GATGCCGCCG ATGGAGTGCC CGCCGCGATC ATCCCGGCCG CCAGCTTTGG CGATTGGGCG
CTGTTCCTGG CCGTGCTGAT CGCCGGTGTC TTGGGCTCCG GCGCGATTGC CCGGTGGGCC
AAGGCGAAAC AGGAGGCCAC GGGGGTTCGA CCGCCGGGTC TGTTCTGGAT GCGGGCGGCT
GCCATCGTGG TGCCCGCCGC CATCGTCCTG ATCGCTCTGG GTGCCACGCT GGATTACCCG
GAACTGCGCG GCTTCAACTT CTCCGGTGGT ATCCACCTGC GCAACGCGCT GATCGCCTTG
TGGTTTGCCC TGTCACTTTA CACCGGCGCC TTCATCGCCG AGATCGTGCG CGCCGGTATC
CTGTCGGTCA GCAAGGGTCA GACCGAGGCC TCTTCGGCGT TGGGGATGCG GGCCAGCTGG
ACGATGAACC TGGTGGTTCT GCCCCAGGCG CTGCGGGTGA TCATCCCGCC GCTGATCTCT
CAGTTCCTGA ACCTGACGAA GAACTCGTCC CTGGCTCTGG CCGTGGGATA TATGGACGTC
CGATCCACCC TTGGGGGGAT CACCATCAAC CAGACGGGCC GCGAGTTGGA GGGGATGCTG
CTTCTGGGCG CGTTCTATCT GATCACGTCG CTGCTGATCT CTGCGGTGAT GAACGTCTAC
AACAACTCCG TCAAGCTGCA GGAGCGTTGA
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| Protein sequence | MATMTDPPRE AFRLSQLIYD TRYRSMTIQV VAFILIMLGL WYLGRNAIQN LSDLGKDFDF
GFLGNRAGYD INQRLIEYSN DSTHGRAAIV GILNTLLVAF LGCITATILG VAAGVLRLSN
NWIVGRLMTV YVEGFRNIPL LLWIIVIFAI MTEAMPQPRD FRGDNPEASM SLGGSVAVTN
RGVYIPNVVF TRSLGGNEMS DAADGVPAAI IPAASFGDWA LFLAVLIAGV LGSGAIARWA
KAKQEATGVR PPGLFWMRAA AIVVPAAIVL IALGATLDYP ELRGFNFSGG IHLRNALIAL
WFALSLYTGA FIAEIVRAGI LSVSKGQTEA SSALGMRASW TMNLVVLPQA LRVIIPPLIS
QFLNLTKNSS LALAVGYMDV RSTLGGITIN QTGRELEGML LLGAFYLITS LLISAVMNVY
NNSVKLQER
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