| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0627 |
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| Symbol | |
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| ID | 3933069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 599442 |
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| End bp | 600458 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902973 |
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| Product | lysine-arginine-ornithine-binding periplasmic protein |
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| Protein accession | YP_508569 |
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| Protein GI | 89053118 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.452411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CCGTATTTCT CGGCACGCTC GCCGTTGCAG GTCTCTCTGC CGGCTTCGTC
TCGGCCCAGA CACTGGGTGA AGTACAAGAG CGGGGCACGC TGAACTGTGG CGTTTCCACC
GGCCTGACCG GTTTCTCCGC ACCTGACGCC AATGGTGAAT GGCAGGGGTT CGACGTCAGC
GTTTGTCGCG CCGTCGCAGC CGCCGTTCTG GGCGACGCCG GTGCCGTTGA ATTTGTTCCC
ACCACGGGCC AGACGCGCTT TACCGCGCTG TCCTCCGGTG AGATCGACAT GCTGGCCCGG
AACACCACCT GGACGTTCTC CCGCGATGTG GACCTCGCGT TCGAATTCGT CGGCGTGAAC
TACTATGACG GTCAGGGCTT CATGGTCCCC CGCGAACTGG GCGTGTCCTC CGCACTGGAG
CTGGACGGCG CAACGGTTTG CATCCAGACC GGCACGACGA CCGAGCTGAA CCTGGCGGAC
TACTTCTCCT CGAACAACAT GAGCTATGAG CCCGTGCCGA TCGAGACCAA CGCGGAAGCG
CAGCAGCAGT ACCTTGCTGG CGCCTGTGAC GTCTACACGA CGGACGCCTC CGGTCTGGCC
GCAACGCGCG CCACGTTCGA GGATCCCTCC GCCCACGTCG TTCTGCCCGA GATCGTGTCC
AAAGAGCCGC TTGGCCCGCT GGTCCGTCAC GGCGACAACG AGTTCGGTGA CGTCGTTCGC
TGGACCCTGA ACGCGCTGAT CGCAGCGGAA GAGCTGGGTG TGACCTCTGC CAATGTCGGC
GAGATCGGTG GCACCACGGA GAACCCCGAG ATCCGTCGCC TTCTGGGCAC CGAGGGTAAC
CTGGGCGAGA TGCTTGGCCT CGACGCCGGT TGGGCCGCTG CGGCCATTGG CGCCGGTGGT
AACTACGGTG AGATCTTTGA TCGCCACATC GGCGAGTCCA CACCCATCGG TCTGGCCCGT
GGCCTGAACG CTCAGTGGAC CGATGGCGGC CTGCTCTACG CACCGCCATT CCGCTAA
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| Protein sequence | MKKSVFLGTL AVAGLSAGFV SAQTLGEVQE RGTLNCGVST GLTGFSAPDA NGEWQGFDVS
VCRAVAAAVL GDAGAVEFVP TTGQTRFTAL SSGEIDMLAR NTTWTFSRDV DLAFEFVGVN
YYDGQGFMVP RELGVSSALE LDGATVCIQT GTTTELNLAD YFSSNNMSYE PVPIETNAEA
QQQYLAGACD VYTTDASGLA ATRATFEDPS AHVVLPEIVS KEPLGPLVRH GDNEFGDVVR
WTLNALIAAE ELGVTSANVG EIGGTTENPE IRRLLGTEGN LGEMLGLDAG WAAAAIGAGG
NYGEIFDRHI GESTPIGLAR GLNAQWTDGG LLYAPPFR
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