Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0620 |
Symbol | |
ID | 3933062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 593454 |
End bp | 594041 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637902966 |
Product | N-acyl-L-homoserine lactone synthetase-like |
Protein accession | YP_508562 |
Protein GI | 89053111 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATGA CAACGCTCTC TTTCGAGAAT TTCCACACCC ACGGCCCGCT ATTCAGCAAC ATGCTGAAGG CGCGGCATCG CACGTTCATT GAGGAAATGG GGTGGGAAAT CCCCTCGGAA GGCAACATGG AATTCGACCA GTATGACACG GCGCAAAGCC GCTGGGTTTG CGTCCATGAC GGAACGCGCG TGCTGGCTGG TGTGCGCCTG ACGCCCACAA CCGCGTCTTG CGGGATCTAC AGCTACATGG TGCGCGATGC TCAACGTGGT CTTCTGGATG CGATCCCGGC CAATCTGTTG GACGACGATG CGCCCATCGC GTCGCATATC TGGGACGCCA ACCGCCTGTT CGTCGCCGAG GGCGTTGAGA CAGATATCCG CCGGGAGGTT CAGCTGTCTC TGATGGGGCA TATGGTCCGC TCGGCCCGCG AGTTGGGGGC CACGACGCTT CTGGGCCTGC TGCCCATCGG CATCCCGCGT CTTGGTCGCC GTCTGGGCAT TGATATGGAG CCGGGCGGGC CGATCATGAA GATCGGTGGC GTGGCCCACC GCTGCTATTT CGTGACCATG GCCTCGAAAA TGCACTGA
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Protein sequence | MQMTTLSFEN FHTHGPLFSN MLKARHRTFI EEMGWEIPSE GNMEFDQYDT AQSRWVCVHD GTRVLAGVRL TPTTASCGIY SYMVRDAQRG LLDAIPANLL DDDAPIASHI WDANRLFVAE GVETDIRREV QLSLMGHMVR SARELGATTL LGLLPIGIPR LGRRLGIDME PGGPIMKIGG VAHRCYFVTM ASKMH
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