| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0619 |
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| Symbol | |
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| ID | 3933061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 592762 |
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| End bp | 593373 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637902965 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_508561 |
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| Protein GI | 89053110 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAG CGCCGGTTCT CGACTTGTTG CTGCACGAAC TCTCGTTGGC AGCACCAGCC
GGTTTCGCTG TTGGTCTCCA CATCCGCTAC GTTTCGCCAT TGATCATGGT GAACACATAC
CCAGATGTCT GGCAGGAGGT GTACACATCC AAACTTTACG GTCTCAGGGA CCCGACGCTT
GCCTGGGGGT TGAGCCACAC GGGAACCCGC CGTTGGAGCC AGATCGGCCT GCCGGATCCC
TTCGGGATTT TGCAGGAATC CGCCGATTAC GGGCTTCGCT ACGGGATGAT CGCCTCTATC
GGCCCTATGT CATCACGCAC CGTCGCCGGT GCGAGCCGCG CAGATCGTGA GTTCACCGAC
GATGAAATGG AGCTTGTCTA CCGGATTGTG CATCGCATGC ACGATCTGTC CGAACCGCCG
GCCCGCCTAT CAAAGGCGCA AGCCGACGCC CTAAAATGCA TCGCGGAGGG GGACCGCCAT
GCAGCTGCTG CCGCGAAACT CGGCATATCC GAAAGCGCCT TCAAGGCGCG TCTGACGTCT
GCACGTCAAA AACTTATGGC GCGAACCACG GCAGAAGCCG TGCAGAGGGC CAAGGAGTAC
GGATTGATTT GA
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| Protein sequence | MTKAPVLDLL LHELSLAAPA GFAVGLHIRY VSPLIMVNTY PDVWQEVYTS KLYGLRDPTL
AWGLSHTGTR RWSQIGLPDP FGILQESADY GLRYGMIASI GPMSSRTVAG ASRADREFTD
DEMELVYRIV HRMHDLSEPP ARLSKAQADA LKCIAEGDRH AAAAAKLGIS ESAFKARLTS
ARQKLMARTT AEAVQRAKEY GLI
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