Gene Jann_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0615 
SymbolrpsM 
ID3933057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp589931 
End bp590299 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content63% 
IMG OID637902961 
Product30S ribosomal protein S13 
Protein accessionYP_508557 
Protein GI89053106 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTA TTGCCGGGGT TAACATCCCC ACCGCCAAGC GCGTTCCGAT CGCGCTGACC 
TATGTCACCG GAATTGGCCA CACCTCTGCT GCTGCGATCT GCGAAGCCGT CGGCATCGAC
GTCACGCGCC GCGTGAATGA GCTGTCGGAC GCCGAGGTTC TCGCCATCCG CGAGCATATC
GACGCCAACT ACGCCGTCGA GGGTGACCTG CGCCGTGAAA CGCAGATGAA CATCAAGCGT
CTGATGGACC TGGGTTGCTA CCGCGGCCTG CGTCACCGTC GCAACCTGCC CGTTCGCGGT
CAGCGGACCC ACACCAACGC TCGCACGCGC AAAGGCCCCG CAAAGGCCAT TGCCGGCAAG
AAGAAATAA
 
Protein sequence
MARIAGVNIP TAKRVPIALT YVTGIGHTSA AAICEAVGID VTRRVNELSD AEVLAIREHI 
DANYAVEGDL RRETQMNIKR LMDLGCYRGL RHRRNLPVRG QRTHTNARTR KGPAKAIAGK
KK