Gene Jann_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0612 
SymbolsecY 
ID3933054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp587144 
End bp588514 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content61% 
IMG OID637902958 
Productpreprotein translocase subunit SecY 
Protein accessionYP_508554 
Protein GI89053103 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCAG CAGCGGAGCA AATGGCCGCC AACATGAGCT GGAGCGCGTT CGGCAAAGCG 
ACCGAACTTC GTCAGCGCAT CTGGTTCACT TTGGGCCTTC TGATCATTTA CCGGATCGGC
ACCTACATTC CCGTGCCCGG TATCGACGCG GTGGAACTTC GCGCTTTCTT TGACAGTGCA
GCGGCGGGCC TTGGCGGTGT GCTCAACATG TTCACCGGCG GCGCGCTGAG CCGTATGGGT
GTCTTCGCCC TTGGGATCAT GCCCTACATT TCGGCCTCGA TCATCGTGCA GCTGATGTCG
GCCATGGTGC CGGCGATGGA GGCCTTGAAG AAAGAAGGCG AAAGCGGGCG CAAGAAGCTG
AACCAATACA CCCGCTATGG CACCGTGGCC CTTGCCACCG CGCAGGCCTA CGGTCTTGCG
GTGTCCATGG AATCCGGCGG CCTTGCGTCT GATCCCGGCT GGTTCTTCCG CGCCGCCTGC
GTGATCACGC TGGTCGGCGG CACCATGTTC CTGATGTGGT TGGGGGAACA GATCACCAAC
CGGGGCATCG GCAACGGGAT CTCCCTGATC ATTTTCGTCG GCATCATCGC CGAGATCCCC
GCCGCCCTTG CCCAGTTCTT CGAGACGGGC CGGTCCGGCG CGCTATCCAC GCCCGCAATT
CTTGGCGTGA TCCTGATGCT GATCGCGACG CTCTTCTTCG TGGTCTTCAT GGAGAGGTCA
CTGCGAAAGA TACACATCCA GTACCCCCGC CGACAGGTGG GCATGAAGGT CTATGATGGC
GGCTCCAGCC ACCTGCCGAT CAAGGTGAAC CCGGCGGGCG TGATCCCGGC GATCTTCGCC
TCGTCCCTGC TGCTGTTGCC CACGACGTTG ACAACCTTCG GCGGAACGGA AGGCTCCGGC
CCGGTGCTTG GCTGGATTCT GGCCAATTTC GGCCCCGGAC AGCCGCTCTA TCTGGTGTTC
TTCGCGTCGA TGATCGTGTT CTTCACGTAT TTCTACACCC TCAACGTGTC CTTCAAGACA
GAGGACGTGG CCGATAACCT GAAGAACCAG AACGGCTTCA TCCCGGGCAT CCGTCCCGGC
GCGCGGACGG CGGAATATCT GGAATACGTG GTGCGACGCA TCCTTGTTCT GGGTGCCGGC
TATCTGGCGC TTGTGTGCAT GATGCCCGAG ATTGTGCGCA CGAACCTGTC GATCACGGCC
TATTTCGGCG GCACCTCGAT CCTGATCATT GTGTCGGTGG GGATGGACAC GGTCCAACAA
ATCCAGTCTC ATCTGCTGGC CCACCAATAC GAAGGCCTGC TGGAGAAGTC CCAGCTGCGC
GGTCGTAAGA GTGGATCGAA GAAACCGCGT AAAGGACCGG CGCGTCGATG A
 
Protein sequence
MSSAAEQMAA NMSWSAFGKA TELRQRIWFT LGLLIIYRIG TYIPVPGIDA VELRAFFDSA 
AAGLGGVLNM FTGGALSRMG VFALGIMPYI SASIIVQLMS AMVPAMEALK KEGESGRKKL
NQYTRYGTVA LATAQAYGLA VSMESGGLAS DPGWFFRAAC VITLVGGTMF LMWLGEQITN
RGIGNGISLI IFVGIIAEIP AALAQFFETG RSGALSTPAI LGVILMLIAT LFFVVFMERS
LRKIHIQYPR RQVGMKVYDG GSSHLPIKVN PAGVIPAIFA SSLLLLPTTL TTFGGTEGSG
PVLGWILANF GPGQPLYLVF FASMIVFFTY FYTLNVSFKT EDVADNLKNQ NGFIPGIRPG
ARTAEYLEYV VRRILVLGAG YLALVCMMPE IVRTNLSITA YFGGTSILII VSVGMDTVQQ
IQSHLLAHQY EGLLEKSQLR GRKSGSKKPR KGPARR