Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0612 |
Symbol | secY |
ID | 3933054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 587144 |
End bp | 588514 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637902958 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_508554 |
Protein GI | 89053103 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCAG CAGCGGAGCA AATGGCCGCC AACATGAGCT GGAGCGCGTT CGGCAAAGCG ACCGAACTTC GTCAGCGCAT CTGGTTCACT TTGGGCCTTC TGATCATTTA CCGGATCGGC ACCTACATTC CCGTGCCCGG TATCGACGCG GTGGAACTTC GCGCTTTCTT TGACAGTGCA GCGGCGGGCC TTGGCGGTGT GCTCAACATG TTCACCGGCG GCGCGCTGAG CCGTATGGGT GTCTTCGCCC TTGGGATCAT GCCCTACATT TCGGCCTCGA TCATCGTGCA GCTGATGTCG GCCATGGTGC CGGCGATGGA GGCCTTGAAG AAAGAAGGCG AAAGCGGGCG CAAGAAGCTG AACCAATACA CCCGCTATGG CACCGTGGCC CTTGCCACCG CGCAGGCCTA CGGTCTTGCG GTGTCCATGG AATCCGGCGG CCTTGCGTCT GATCCCGGCT GGTTCTTCCG CGCCGCCTGC GTGATCACGC TGGTCGGCGG CACCATGTTC CTGATGTGGT TGGGGGAACA GATCACCAAC CGGGGCATCG GCAACGGGAT CTCCCTGATC ATTTTCGTCG GCATCATCGC CGAGATCCCC GCCGCCCTTG CCCAGTTCTT CGAGACGGGC CGGTCCGGCG CGCTATCCAC GCCCGCAATT CTTGGCGTGA TCCTGATGCT GATCGCGACG CTCTTCTTCG TGGTCTTCAT GGAGAGGTCA CTGCGAAAGA TACACATCCA GTACCCCCGC CGACAGGTGG GCATGAAGGT CTATGATGGC GGCTCCAGCC ACCTGCCGAT CAAGGTGAAC CCGGCGGGCG TGATCCCGGC GATCTTCGCC TCGTCCCTGC TGCTGTTGCC CACGACGTTG ACAACCTTCG GCGGAACGGA AGGCTCCGGC CCGGTGCTTG GCTGGATTCT GGCCAATTTC GGCCCCGGAC AGCCGCTCTA TCTGGTGTTC TTCGCGTCGA TGATCGTGTT CTTCACGTAT TTCTACACCC TCAACGTGTC CTTCAAGACA GAGGACGTGG CCGATAACCT GAAGAACCAG AACGGCTTCA TCCCGGGCAT CCGTCCCGGC GCGCGGACGG CGGAATATCT GGAATACGTG GTGCGACGCA TCCTTGTTCT GGGTGCCGGC TATCTGGCGC TTGTGTGCAT GATGCCCGAG ATTGTGCGCA CGAACCTGTC GATCACGGCC TATTTCGGCG GCACCTCGAT CCTGATCATT GTGTCGGTGG GGATGGACAC GGTCCAACAA ATCCAGTCTC ATCTGCTGGC CCACCAATAC GAAGGCCTGC TGGAGAAGTC CCAGCTGCGC GGTCGTAAGA GTGGATCGAA GAAACCGCGT AAAGGACCGG CGCGTCGATG A
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Protein sequence | MSSAAEQMAA NMSWSAFGKA TELRQRIWFT LGLLIIYRIG TYIPVPGIDA VELRAFFDSA AAGLGGVLNM FTGGALSRMG VFALGIMPYI SASIIVQLMS AMVPAMEALK KEGESGRKKL NQYTRYGTVA LATAQAYGLA VSMESGGLAS DPGWFFRAAC VITLVGGTMF LMWLGEQITN RGIGNGISLI IFVGIIAEIP AALAQFFETG RSGALSTPAI LGVILMLIAT LFFVVFMERS LRKIHIQYPR RQVGMKVYDG GSSHLPIKVN PAGVIPAIFA SSLLLLPTTL TTFGGTEGSG PVLGWILANF GPGQPLYLVF FASMIVFFTY FYTLNVSFKT EDVADNLKNQ NGFIPGIRPG ARTAEYLEYV VRRILVLGAG YLALVCMMPE IVRTNLSITA YFGGTSILII VSVGMDTVQQ IQSHLLAHQY EGLLEKSQLR GRKSGSKKPR KGPARR
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