Gene Jann_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0609 
SymbolrpmD 
ID3933051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp585464 
End bp585649 
Gene Length186 bp 
Protein Length61 aa 
Translation table11 
GC content60% 
IMG OID637902955 
Product50S ribosomal protein L30 
Protein accessionYP_508551 
Protein GI89053100 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.446566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTA TCGTCGTTAA GCAGATCGGG TCCCCGATCC GTCGCCCCGA GATCCAGCGC 
AAGACGCTGA TTGGTCTGGG CCTGAACAAG ATGCACCGCA CGCGTGAGCT GGAGGATACC
CCCTCCGTGC GCGGTATGAT CAACAAGATC CCGCATCTGG TGGAAATCGT GGAAGAGCGC
GGCTGA
 
Protein sequence
MATIVVKQIG SPIRRPEIQR KTLIGLGLNK MHRTRELEDT PSVRGMINKI PHLVEIVEER 
G