Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0609 |
Symbol | rpmD |
ID | 3933051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 585464 |
End bp | 585649 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637902955 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_508551 |
Protein GI | 89053100 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.446566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTA TCGTCGTTAA GCAGATCGGG TCCCCGATCC GTCGCCCCGA GATCCAGCGC AAGACGCTGA TTGGTCTGGG CCTGAACAAG ATGCACCGCA CGCGTGAGCT GGAGGATACC CCCTCCGTGC GCGGTATGAT CAACAAGATC CCGCATCTGG TGGAAATCGT GGAAGAGCGC GGCTGA
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Protein sequence | MATIVVKQIG SPIRRPEIQR KTLIGLGLNK MHRTRELEDT PSVRGMINKI PHLVEIVEER G
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