| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0605 |
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| Symbol | rpsH |
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| ID | 3933047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 583440 |
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| End bp | 583832 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637902951 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_508547 |
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| Protein GI | 89053096 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.354431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGATC CTATCAGTGA TATGCTGACC CGCATCCGCA ACAGCCAGAT GCGCGGTAAG
TCGACGGTCG AGACCCCGGC CTCCAAGGCG CGCGCACGCG TCCTGGATGT GCTGGCGGAC
GAAGGCTACA TCCGCGGTTA CGAGGCCAAG ACTGGCAAAG ACGGCCACCC GGCCTTCGAG
ATCAGCCTGA AGTACTATGA AGGTACGCCC GTCATTCGTG AGTTGAAGCG CGTGTCCAAG
CCTGGTCGCC GCGTCTACAT GAGCGTGGGT GACATCCCGC AGGTCCGTCA GGGCCTGGGT
GTGTCGATCG TCTCCACCTC CAAGGGCGTC ATGTCCGATG CAAACGCTCG CAGCCAGAAT
GTTGGCGGCG AAGTGCTTTG CACCATCTTC TAA
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| Protein sequence | MNDPISDMLT RIRNSQMRGK STVETPASKA RARVLDVLAD EGYIRGYEAK TGKDGHPAFE
ISLKYYEGTP VIRELKRVSK PGRRVYMSVG DIPQVRQGLG VSIVSTSKGV MSDANARSQN
VGGEVLCTIF
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