Gene Jann_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0604 
SymbolrpsN 
ID3933046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp583120 
End bp583425 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content58% 
IMG OID637902950 
Product30S ribosomal protein S14 
Protein accessionYP_508546 
Protein GI89053095 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0199] Ribosomal protein S14 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.472799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG AAGCGATGAT CGAACGCCAG AAGAAGCGGG AGCGTCTGGT GGCAAAGTAT 
GCCGACAAAC GTGCCGCTCT GAAGGAGATT GCACGGGACG AGGACCTTCC GATGGAGGAC
CGGTTCAAAG CTCGGCTCAA ACTGGCGAAA CTGCCGCGAA ACAGCTCGGC CACTCGTCTC
AACAACCGTT GCCAGCTGAC GGGGCGTCCC CGGGCGTATT ACCGCAAGCT GAAAATGTCG
CGGATCAAGC TGCGTGATCT GGCCTCCAAC GGCCAAATCC CCGGCATGGT CAAGTCGAGC
TGGTAA
 
Protein sequence
MAKEAMIERQ KKRERLVAKY ADKRAALKEI ARDEDLPMED RFKARLKLAK LPRNSSATRL 
NNRCQLTGRP RAYYRKLKMS RIKLRDLASN GQIPGMVKSS W