Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0596 |
Symbol | |
ID | 3933038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 579216 |
End bp | 579917 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637902942 |
Product | hypothetical protein |
Protein accession | YP_508538 |
Protein GI | 89053087 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02466] conserved hypothetical protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTGTCGAT CACGGACAGG CATAGCGCGC ATTCGTTTCC AAACCGTTGC GACACGGGCC CACCCGCCCT ACAACCCGCC CATGGCCCAG ATAAAATCCC TCTTCGTCAC CCGCCTCTAC CACGCCAGAT TGTCGGAGCT TGGGCCAGAC ATCGACGCGG ATGAGCTGTC GGCCACCTGC TTTTCCGTCG CCGAGGATGA CGATGCGGGC CAGGATTGGT GTGAGGAGAA CGGCTTTCCC GGCTACACCT CCTATGCGTC GCTGACAGAC CTGCCCTGGC GGATGCCGAT CTTTGCGGAG GTCGTCAAAG CGCTCGACGC CCATGTCGCG GCCTTCGCGG AAGATCTGGA GTTTGATCTG GAGGGGCGCA AACTGGTTCT GGAGGACATC TGGATCAACA TCCTGCCCGA AGGCGGGACC CATTCCAGTC ACATCCACCC GCATTCGGTG ATCTCGGGCA CGACTTATGT GCAGATCCCC CCCGGCGCAC GGTCAATCAA GCTGGAGGAC CCGCGCCACG CGATGATGAT GGCCGCGCCC GCCCGCAAAA CGGATGCGCG AGACGAGATG CGCGCCTTCG TCTACCCGGG CCCGGAGGCG GGCGATGTCC TGCTTTGGGA AAGCTGGCTG CGCCATGAGG TGCCGATGAA TATGGACGAG GACGACCGGG TCAGCGTGAG TTTCAATTAT CGGTGGGAGT GA
|
Protein sequence | MCRSRTGIAR IRFQTVATRA HPPYNPPMAQ IKSLFVTRLY HARLSELGPD IDADELSATC FSVAEDDDAG QDWCEENGFP GYTSYASLTD LPWRMPIFAE VVKALDAHVA AFAEDLEFDL EGRKLVLEDI WINILPEGGT HSSHIHPHSV ISGTTYVQIP PGARSIKLED PRHAMMMAAP ARKTDARDEM RAFVYPGPEA GDVLLWESWL RHEVPMNMDE DDRVSVSFNY RWE
|
| |