Gene Jann_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0596 
Symbol 
ID3933038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp579216 
End bp579917 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID637902942 
Producthypothetical protein 
Protein accessionYP_508538 
Protein GI89053087 
COG category 
COG ID 
TIGRFAM ID[TIGR02466] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGTCGAT CACGGACAGG CATAGCGCGC ATTCGTTTCC AAACCGTTGC GACACGGGCC 
CACCCGCCCT ACAACCCGCC CATGGCCCAG ATAAAATCCC TCTTCGTCAC CCGCCTCTAC
CACGCCAGAT TGTCGGAGCT TGGGCCAGAC ATCGACGCGG ATGAGCTGTC GGCCACCTGC
TTTTCCGTCG CCGAGGATGA CGATGCGGGC CAGGATTGGT GTGAGGAGAA CGGCTTTCCC
GGCTACACCT CCTATGCGTC GCTGACAGAC CTGCCCTGGC GGATGCCGAT CTTTGCGGAG
GTCGTCAAAG CGCTCGACGC CCATGTCGCG GCCTTCGCGG AAGATCTGGA GTTTGATCTG
GAGGGGCGCA AACTGGTTCT GGAGGACATC TGGATCAACA TCCTGCCCGA AGGCGGGACC
CATTCCAGTC ACATCCACCC GCATTCGGTG ATCTCGGGCA CGACTTATGT GCAGATCCCC
CCCGGCGCAC GGTCAATCAA GCTGGAGGAC CCGCGCCACG CGATGATGAT GGCCGCGCCC
GCCCGCAAAA CGGATGCGCG AGACGAGATG CGCGCCTTCG TCTACCCGGG CCCGGAGGCG
GGCGATGTCC TGCTTTGGGA AAGCTGGCTG CGCCATGAGG TGCCGATGAA TATGGACGAG
GACGACCGGG TCAGCGTGAG TTTCAATTAT CGGTGGGAGT GA
 
Protein sequence
MCRSRTGIAR IRFQTVATRA HPPYNPPMAQ IKSLFVTRLY HARLSELGPD IDADELSATC 
FSVAEDDDAG QDWCEENGFP GYTSYASLTD LPWRMPIFAE VVKALDAHVA AFAEDLEFDL
EGRKLVLEDI WINILPEGGT HSSHIHPHSV ISGTTYVQIP PGARSIKLED PRHAMMMAAP
ARKTDARDEM RAFVYPGPEA GDVLLWESWL RHEVPMNMDE DDRVSVSFNY RWE