| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0591 |
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| Symbol | rpsC |
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| ID | 3933033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 576023 |
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| End bp | 576766 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637902937 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_508533 |
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| Protein GI | 89053082 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACATA AAGTCAACCC CATCGGGATG CGTCTTCAGG TGAACCGCAC CTGGGACAGC
CGCTGGTACG CAGACACCAA GGATTACGGT GACCTGCTGC TGGAAGACAT CAAGATCCGC
GACTACATCA AAAAAGGCTG GTGGGAGCAT GTTGCAAAGC GCGACAAGCG TCCGGCTGGC
GATGCGGGGA TCTCCAAGAT CATCATCGAG CGTCCGCACA AGAAGTGCCG TGTGACGATC
CATTCGGCGC GTCCGGGTGT CATCATCGGC AAGAAGGGTG CAGATATCGA AGGCCTGCGC
AAGAAACTGG CCGAGATCAC GGACAGCGAA TTGCACCTCA ACATCGTTGA GATCCGCAAG
CCAGAGCTGG ATGCGCGTCT GGTTGCTGAG AGCATCGCGC AACAGCTGGA GCGTCGTGTG
TCCTTCCGCC GTGCCATGAA GCGGGCGGTT CAAAACGCCA TGCGGATGGG GTCGCTGGGT
ATCCGGGTGA ACGTCGCGGG CCGCCTTGGT GGCGCCGAGA TCGCACGGAC CGAATGGTAT
CGTGAGGGGC GCGTGCCGCT TCACACGCTG CGGGCCGACA TCGACTACGC ACATGCCGAG
GCGGAAACAG CCTATGGCAT CATCGGTATC AAGACCTGGA TCTTCAAAGG TGAAATCATG
GAGCACGATC CGTCGGCCCA TGATCGTCGC CAGCAGGAGC TTCAGGAAAG CGGTGGGGCC
TCGCGCCCGC GCCGTGATCG CTGA
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| Protein sequence | MGHKVNPIGM RLQVNRTWDS RWYADTKDYG DLLLEDIKIR DYIKKGWWEH VAKRDKRPAG
DAGISKIIIE RPHKKCRVTI HSARPGVIIG KKGADIEGLR KKLAEITDSE LHLNIVEIRK
PELDARLVAE SIAQQLERRV SFRRAMKRAV QNAMRMGSLG IRVNVAGRLG GAEIARTEWY
REGRVPLHTL RADIDYAHAE AETAYGIIGI KTWIFKGEIM EHDPSAHDRR QQELQESGGA
SRPRRDR
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