| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0590 |
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| Symbol | rplV |
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| ID | 3933032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 575643 |
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| End bp | 576023 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637902936 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_508532 |
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| Protein GI | 89053081 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAGG ATAAGAACCC CCGCCGCGTG GCGGACAATG AGGCGATGGC CAAGCTGCGT
ATGCTGAAAA CCAGCCCGCA GAAGCTGAAC CTTGTTGCCG GTCTGATCCG TGGCCAGAAG
GTTGAAAAGG CCCTGACGGA CCTGACCTTC TCCAAGAAGC GGATCGCTGT AGACGTGAAG
AAATGCCTTC AGTCCGCCAT CGCCAACGCC GAGAACAACC ACGGTCTGGA CGTCGACGAG
CTGATCGTTG CCGAGGCCTG GGTTGGCAAG AACCTGGTCA TGAAACGCGG TCGCCCGCGG
GCCCGTGGAC GGTTCGGTAA AATTCTCAAG CCGTTCTCAG AATTGACGAT CACGGTTCGC
CAGGTCGAGG AGACTTCGTA A
|
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| Protein sequence | MSKDKNPRRV ADNEAMAKLR MLKTSPQKLN LVAGLIRGQK VEKALTDLTF SKKRIAVDVK
KCLQSAIANA ENNHGLDVDE LIVAEAWVGK NLVMKRGRPR ARGRFGKILK PFSELTITVR
QVEETS
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