Gene Jann_0584 details

Gene Information

• Locus tag: Jann_0584
• Symbol: rplD
• ID: 3933026
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 572082
• End bp: 572702
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637902930
• Product: 50S ribosomal protein L4
• Protein accession: YP_508526
• Protein GI: 89053075
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.745098
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAGTCG ACGTTATCAA GCTGGACGGT AAGAAAGCCG GTTCGGTCGA CCTGGACGAG 
GCCCTGTTCG GGCTGGAGCC ACGCGCCGAT ATCCTGCACC GTGTCGTTCG CTGGCAGCGC 
AACAATGCGC AGGCCGGCAC CCACAAGGTG AAAACGCGCC GCGAGGTCAG CTACTCCACC 
AAGAAGATCT ATCGCCAGAA GGGCACCGGC GGCGCACGCC ACGGCGCGCG GTCGGCTCCG 
ATCTTCCGCG GGGGTGGTGT CTACAAGGGC CCAACACCGC GCAGCCACGG TCATGAGCTG 
ACGAAGAAGT TCCGCAAGCT GGGTCTGCGC CACGCGCTGT CCGCCAAGGC CGCAGAAGGC 
CGTCTTGTGG TGATCGAATC CATCGCGATG GACGAGGCGA AAACCTCTGC CCTGGCCAAA 
CAGGTCAAGG AAATGGGGTG GAAGCGGGCG CTGATCATCG ACGGATCCGA CGTGGACGCA 
AACTTCGCCC AGGCCGCCCG CAACATCGAA GGTCTCGATG TGCTGCCGAC CATGGGCGCC 
AACGTCTATG ACATCCTCAA GCGTGACACC CTGGTGATCA CGAAGGCGGG TGTCGAAGCA 
CTGGAGGCTC GGTTGAAATG A 

 

Protein sequence

MKVDVIKLDG KKAGSVDLDE ALFGLEPRAD ILHRVVRWQR NNAQAGTHKV KTRREVSYST 
KKIYRQKGTG GARHGARSAP IFRGGGVYKG PTPRSHGHEL TKKFRKLGLR HALSAKAAEG 
RLVVIESIAM DEAKTSALAK QVKEMGWKRA LIIDGSDVDA NFAQAARNIE GLDVLPTMGA 
NVYDILKRDT LVITKAGVEA LEARLK