Gene Jann_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0561 
Symbol 
ID3933003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp548053 
End bp548508 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID637902907 
Producthypothetical protein 
Protein accessionYP_508503 
Protein GI89053052 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGG ACCATGACAT TACCGGAGAC ACCCTGACAC TTCGCCGAAC CTATGCCTCG 
GCCAAAGAAG ACGTCTTCAA CGCCTGGATC GACGCGTCAA AGACGACCCA TTGGTGGGGC
TGCAAGGACA CCAGCAAGGT GGTCTCCACC ATCGATGCCC GCGTCGGCGG CACCTACCAT
CACCTGATGA GCATTGATGG CGTCGGCGAC CACCTGATCG ACGGGACGAT CCAGACCTTT
GACCCGCCGA ACCGGCTGAC CTATACGATG TCGGGGATGC CGGGCCAGTC CCCGATGCGC
GTCGACGTCA GGTTCAAGGA GGTCGATGGC GGCACAGAGG TCACGCTGAC CCATGCACCC
TTGCCGGAGG CGTTCAATCA GATGGTCCTG GCCGGGTGGA CCGCCTCGTT CGAGCGTCTT
GCCAGGTTCT TTGACGGAGA GTTGCGCGTC GCATAA
 
Protein sequence
MTTDHDITGD TLTLRRTYAS AKEDVFNAWI DASKTTHWWG CKDTSKVVST IDARVGGTYH 
HLMSIDGVGD HLIDGTIQTF DPPNRLTYTM SGMPGQSPMR VDVRFKEVDG GTEVTLTHAP
LPEAFNQMVL AGWTASFERL ARFFDGELRV A