Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0555 |
Symbol | |
ID | 3932996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 543640 |
End bp | 544815 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637902900 |
Product | elongation factor Tu |
Protein accession | YP_508497 |
Protein GI | 89053046 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGG AAAAGTTTGA GCGTTCTAAG CCGCATGTGA ACATCGGTAC GATTGGTCAT GTTGACCATG GTAAGACGAC GTTGACGGCG GCGATTACGA AGCAGTTTGG CGATTTTCAG GATTACGCGT CGATTGACTC GGCGCCTGAG GAGCGGGCGC GGGGGATCAC GATCTCGACG GCGCACGTGG AATACGAGAC GGAAAACCGT CACTATGCCC ACGTCGACTG CCCTGGCCAC GCGGATTATG TGAAGAACAT GATCACCGGT GCGGCGCAGA TGGACGGCGC GATCCTGGTG GTGAACGCGG CCGATGGCCC GATGCCCCAG ACGCGCGAGC ACATCCTGCT GGGTCGTCAG GTCGGCATTC CGTACATGGT TGTCTACATG AACAAGGTCG ACCAGGTGGA TGACGAGGAG CTGCTGGAGC TTGTCGAGAT GGAAATTCGG GAATTGTTAA GCTCCTACGA GTATCCTGGC GACGATATCC CTGTGATCCC CGGTTCGGCC CTGGCCGCTC TGGAAGGTCG TGACGATGCG ATCGGCAAAG ACTCCATCGA CAAGCTGATG GCGGCCGTGG ACGAGTATAT CCCGACGCCC GCGCGCGCCG TGGATCAGCC GTTCCTGATG CCGATCGAGG ACGTGTTCTC GATCTCGGGT CGGGGTACGG TTGTGACCGG TCGTGTGGAG CGTGGCGTGA TCAACGTGGG CGACGAGATC TCCATCGTCG GCATCCGCGA CACCACGAAG ACGACCTGCA CGGGCGTTGA GATGTTCCGC AAGCTGCTGG ATCGCGGCGA GGCGGGCGAC AATATCGGCG CGCTGCTGCG TGGTGTGGAC CGTGAAGGTG TTGAGCGCGG GCAAGTTCTC TGCAAGCCCG GCTCGGTTGA CCCGCACACG AAGTTCGAGG CGGAGGCGTA TATCCTGACG AAGGAAGAGG GTGGCCGTCA CACGCCGTTC TTCGCCAACT ACCGCCCGCA ATTCTACTTC CGCACGACGG ATGTGACCGG CACGGTGAAC CTGCCTGCGG GCACGGAAAT GGTGATGCCC GGCGACAACC TGAAGTTCGA GGTCGAGCTG ATCGCGCCGA TCGCAATGGA AGACGGCCTG CGCTTCGCCA TCCGCGAAGG CGGCCGGACC GTTGGTGCCG GTGTGGTCGC AAAAATCATC GAGTGA
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Protein sequence | MAKEKFERSK PHVNIGTIGH VDHGKTTLTA AITKQFGDFQ DYASIDSAPE ERARGITIST AHVEYETENR HYAHVDCPGH ADYVKNMITG AAQMDGAILV VNAADGPMPQ TREHILLGRQ VGIPYMVVYM NKVDQVDDEE LLELVEMEIR ELLSSYEYPG DDIPVIPGSA LAALEGRDDA IGKDSIDKLM AAVDEYIPTP ARAVDQPFLM PIEDVFSISG RGTVVTGRVE RGVINVGDEI SIVGIRDTTK TTCTGVEMFR KLLDRGEAGD NIGALLRGVD REGVERGQVL CKPGSVDPHT KFEAEAYILT KEEGGRHTPF FANYRPQFYF RTTDVTGTVN LPAGTEMVMP GDNLKFEVEL IAPIAMEDGL RFAIREGGRT VGAGVVAKII E
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