Gene Jann_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0555 
Symbol 
ID3932996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp543640 
End bp544815 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content61% 
IMG OID637902900 
Productelongation factor Tu 
Protein accessionYP_508497 
Protein GI89053046 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGG AAAAGTTTGA GCGTTCTAAG CCGCATGTGA ACATCGGTAC GATTGGTCAT 
GTTGACCATG GTAAGACGAC GTTGACGGCG GCGATTACGA AGCAGTTTGG CGATTTTCAG
GATTACGCGT CGATTGACTC GGCGCCTGAG GAGCGGGCGC GGGGGATCAC GATCTCGACG
GCGCACGTGG AATACGAGAC GGAAAACCGT CACTATGCCC ACGTCGACTG CCCTGGCCAC
GCGGATTATG TGAAGAACAT GATCACCGGT GCGGCGCAGA TGGACGGCGC GATCCTGGTG
GTGAACGCGG CCGATGGCCC GATGCCCCAG ACGCGCGAGC ACATCCTGCT GGGTCGTCAG
GTCGGCATTC CGTACATGGT TGTCTACATG AACAAGGTCG ACCAGGTGGA TGACGAGGAG
CTGCTGGAGC TTGTCGAGAT GGAAATTCGG GAATTGTTAA GCTCCTACGA GTATCCTGGC
GACGATATCC CTGTGATCCC CGGTTCGGCC CTGGCCGCTC TGGAAGGTCG TGACGATGCG
ATCGGCAAAG ACTCCATCGA CAAGCTGATG GCGGCCGTGG ACGAGTATAT CCCGACGCCC
GCGCGCGCCG TGGATCAGCC GTTCCTGATG CCGATCGAGG ACGTGTTCTC GATCTCGGGT
CGGGGTACGG TTGTGACCGG TCGTGTGGAG CGTGGCGTGA TCAACGTGGG CGACGAGATC
TCCATCGTCG GCATCCGCGA CACCACGAAG ACGACCTGCA CGGGCGTTGA GATGTTCCGC
AAGCTGCTGG ATCGCGGCGA GGCGGGCGAC AATATCGGCG CGCTGCTGCG TGGTGTGGAC
CGTGAAGGTG TTGAGCGCGG GCAAGTTCTC TGCAAGCCCG GCTCGGTTGA CCCGCACACG
AAGTTCGAGG CGGAGGCGTA TATCCTGACG AAGGAAGAGG GTGGCCGTCA CACGCCGTTC
TTCGCCAACT ACCGCCCGCA ATTCTACTTC CGCACGACGG ATGTGACCGG CACGGTGAAC
CTGCCTGCGG GCACGGAAAT GGTGATGCCC GGCGACAACC TGAAGTTCGA GGTCGAGCTG
ATCGCGCCGA TCGCAATGGA AGACGGCCTG CGCTTCGCCA TCCGCGAAGG CGGCCGGACC
GTTGGTGCCG GTGTGGTCGC AAAAATCATC GAGTGA
 
Protein sequence
MAKEKFERSK PHVNIGTIGH VDHGKTTLTA AITKQFGDFQ DYASIDSAPE ERARGITIST 
AHVEYETENR HYAHVDCPGH ADYVKNMITG AAQMDGAILV VNAADGPMPQ TREHILLGRQ
VGIPYMVVYM NKVDQVDDEE LLELVEMEIR ELLSSYEYPG DDIPVIPGSA LAALEGRDDA
IGKDSIDKLM AAVDEYIPTP ARAVDQPFLM PIEDVFSISG RGTVVTGRVE RGVINVGDEI
SIVGIRDTTK TTCTGVEMFR KLLDRGEAGD NIGALLRGVD REGVERGQVL CKPGSVDPHT
KFEAEAYILT KEEGGRHTPF FANYRPQFYF RTTDVTGTVN LPAGTEMVMP GDNLKFEVEL
IAPIAMEDGL RFAIREGGRT VGAGVVAKII E