| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0553 |
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| Symbol | |
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| ID | 3932994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 540378 |
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| End bp | 542705 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902898 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_508495 |
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| Protein GI | 89053044 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTG ATGATGACAC ACAAGATGAC CGCCCCGATC CCGGGCCTGG GTCCGCATCC
ATTTCGGAGC CGTTGAGCCG TGCCATCGGC TCGCGGTATC TTCAGTATGC ATTGTCCACG
ATCATGCACC GCGCTCTGCC TGACGCGCGC GACGGGTTGA AGCCGGTTCA CCGCCGTATT
CTTTATGCGA TGCGAGAGCT GCGGCTCGCC TCCAACGGGG GCTTTCGGAA GTCCGCCAAG
ATTTCTGGCG ATGTGATGGG CAATTACCAC CCCCACGGCG ATGCCGCGAT TTACGATGCG
ATGGCGCGCC TGGCGCAGGA TTTCGTCATT CGCTACCCGC TGGTCGATGG GCAAGGCAAC
TTCGGCAATA TCGACGGCGA TAACCCCGCC GCCGCTCGCT ACACGGAAGC GCGCATGACC
GCCGTGGCCG AGGCGCTGCT GGAGGGCCTG TCAGAGGACG CGGTCAATTT CCGCGACAAT
TACGACGGCA CCCTGCAAGA GCCCGAAGTC CTGCCCGCAC AGGTCCCAAA CCTTCTGGCC
AACGGCTCCA GCGGGATCGC TGTGGGCATG GCAACGAACA TCCCGCCCCA CAATCTGGAC
GAGTTGATCG CCGCCTGTCT GCACCTGATC AAAACCCCCG ATGCCCGCGA TGAGACGTTG
CTGAACTACG TCCAGGGCCC AGATTTCCCG ACCGGCGGCG TCATCGTCGA GCCGCGCGAG
AGCATGGCCG AGACCTACCG CACCGGCAAA GGCGGCTTCC GCGTGCGGGC GACGCATGAG
ATCGAGGATC TGGGTCGCGG CCAATGGCAG ATCGTTGTCA CGGAAATCCC CTATCAGGTC
CAGAAATCCA AGCTGATCGA GAAACTGGCC GAGCTGATCC AGCTGAAGAA GATGCCGATC
CTCGCCGATG TGCGCGATGA GAGTGCCGAT GATATTCGCA TCGTGCTGGA ACCGCGCTCC
AAAACCGTGG ACCCCGATGT GCTGATGGCC GCGCTCTACC GGCAGTCCGA TCTTGAGAAC
CGTTTTTCAT TGAACATGAA CGTGCTGATC GATGGCCGCA CGCCCAAAGT CTGCTCTCTT
AAAGAGGTGC TGCGCGCGTT CCTCGACCAC CGCCAGGACG TGCTGATGCG CCGGTCCCGT
CATCGGATGG CGCAGATCGA CCACCGTCTT GAAGTGTTGG AAGGGTTCCT GATTGCGTTC
CTGAACCTCG ACCGTGTGAT CGATATCATC CGTTACGACG ACAGCCCCAA AGCCGCGTTG
ATGCGCGAGG ATTGGGGCCA GGATTTCGTC CGTGCGATGT CCGAGGCCGA CTACGTGTCC
CCCAAACCTG GCGAAGGGGA GCTGACGGAA GTTCAGGTCG AAGCGATCCT CAACATGCGC
CTGCGCAGCT TGCGTCGTCT GGAAGAGATG GAGTTGCAGG CCGAGCGTGA TCGGTTGATG
GAAGAACGCG CGGGGCTGGA AGATTTGCTG GCCGAAGAAA GCCTCCAATG GGGCCGTATT
GCCGAGGAAC TGCGCGAGGT GCGCAAGAAG TTCGGCTCCC GCGCGGATGG CGGCGCGCGG
CGCACGCAAT TTGCCGAGGC GGGCAACATC GAAGAAGTCT CCCTTGAGGC GATGATCGAG
CGCGAGCCTG TCACAATCGT CTGCTCTCAG ATGGGCTGGA TCCGCGCCAT GAAGGGCCAT
GTGGACCTCA GCCAAGAGAT GAAGTTCCGC GACGGCGACG GCCCGCGTTT TGCGATCCAT
GCAGAGACGA CGGATAAGCT GCTGATCCTC GGCTCCCAGG GTCGCGTCTA CACGCTCGGG
GCCAATGGTC TGCCCGGCGG GCGGGGTTTG GGAGAGCCTT TGCGCCTGAT GGTGGACCTG
CCAAACGAGG TGCAGATCGT CGATCTGTTC GTGCACCATC CGGGCGCAAA GCGTCTGATG
GCGTCCAGTG CGGGCGATGG GTTCCTCGTG GCAGAGGAAG ATATCCTCGC CCAGACCCGC
TCCGGCAAGC AGGTGCTGAA CGTGAAGGAC GGTGTCACGG CCAGCGTTTG CCGCGCCGTC
GCCCCGGAGG ATGACCACGT GGCCGTCGTC GGAGAGAACC GTAAACTGTT GGTCTTCCCC
CTGACGGAAC TGCCCGAGAT GGGGCGTGGC AAGGGCGTGC GATTGCAAAA ATACAAAGAC
GGTGGCCTTT CGGATGCGCG TACCTTCCGG CTGGAGGACG GTCTTGTGTG GCTGGATCCC
GCGGGCCGGA CCCGCACCGA GGTTGAGCTT GGGGAATGGG CGGCCAAGCG CGCAGGGGCA
GGTCGCATGG CGCCCCGTGG GTTCCCCCGC GACAACCAAT TTAACTAG
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| Protein sequence | MSSDDDTQDD RPDPGPGSAS ISEPLSRAIG SRYLQYALST IMHRALPDAR DGLKPVHRRI
LYAMRELRLA SNGGFRKSAK ISGDVMGNYH PHGDAAIYDA MARLAQDFVI RYPLVDGQGN
FGNIDGDNPA AARYTEARMT AVAEALLEGL SEDAVNFRDN YDGTLQEPEV LPAQVPNLLA
NGSSGIAVGM ATNIPPHNLD ELIAACLHLI KTPDARDETL LNYVQGPDFP TGGVIVEPRE
SMAETYRTGK GGFRVRATHE IEDLGRGQWQ IVVTEIPYQV QKSKLIEKLA ELIQLKKMPI
LADVRDESAD DIRIVLEPRS KTVDPDVLMA ALYRQSDLEN RFSLNMNVLI DGRTPKVCSL
KEVLRAFLDH RQDVLMRRSR HRMAQIDHRL EVLEGFLIAF LNLDRVIDII RYDDSPKAAL
MREDWGQDFV RAMSEADYVS PKPGEGELTE VQVEAILNMR LRSLRRLEEM ELQAERDRLM
EERAGLEDLL AEESLQWGRI AEELREVRKK FGSRADGGAR RTQFAEAGNI EEVSLEAMIE
REPVTIVCSQ MGWIRAMKGH VDLSQEMKFR DGDGPRFAIH AETTDKLLIL GSQGRVYTLG
ANGLPGGRGL GEPLRLMVDL PNEVQIVDLF VHHPGAKRLM ASSAGDGFLV AEEDILAQTR
SGKQVLNVKD GVTASVCRAV APEDDHVAVV GENRKLLVFP LTELPEMGRG KGVRLQKYKD
GGLSDARTFR LEDGLVWLDP AGRTRTEVEL GEWAAKRAGA GRMAPRGFPR DNQFN
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