| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0551 |
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| Symbol | |
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| ID | 3932992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 538707 |
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| End bp | 539534 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902896 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_508493 |
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| Protein GI | 89053042 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACGAT CCATCCTGAT CACCGGCAGC TCCTCCGGCA TTGGCCACGT GGCCGCACAC
ACCCTGCACG CCCGGGGCTG GCGCGTCTTT GCCTGCGTTC GTCGCGATGA AGATCTCGCG
CGGCTGGAGA CCGAGGGGCT GGAAAGCGGC CTTCTGGATG TCAGCGATGC CGACAGCATT
GAGGCCGGGC TCGCCGACGT GCTGGACCGG ACCGGCGGCA CGCTTGACGC GCTCTTCAAC
AATGCGGGCT TCGGGCTGCC TGGTCTGGTG GAAGATCTGC CCACCGATGC CCTGCGCGCG
ACGTTTGAGA CCAATGTCTT CGGCCTGCAC CATCTGACCC GCGCGGTGAT CCCCACGATG
CGCCGACAGG GCCACGGACG AATTGTCCAG CATTCGTCGG GCTTTGGGCG CCATGTGATG
AAATGGCGGG GCGCCTACAA TGCCTCCAAA CACGCGGTGG AGGGGCTGAC GGATACATTG
CGGCTGGAGA TGCGCGGAAC CGGCATCCAT ATCTCGACCC TCAATACCGG GCCCGTCACC
TCAAAATTCC GCCTGAATTC CATTCCGCAG TTCGAGCGCT GGATCGAGTG GGAGGCATCC
GCCGATCCGG ATCGCTACAA GAGAGAGTTG TTCCGTCACC TCTACGAGGA TACCGGCCCT
GCTCCGTTCC AGCGCGAGCC CGATGCTGTC GTCAAACGCC TGATCCACGC GATTGAGGCC
GACGCCCCGC GCCCACGCTA TCACATCACA CCCGCCGTCC ACTTCGCCGA GGCTCTGCGC
CGCACCTTGC CTCAGCGGCT GCTGGACGCG ATTGCGGTCA GACTTTGA
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| Protein sequence | MTRSILITGS SSGIGHVAAH TLHARGWRVF ACVRRDEDLA RLETEGLESG LLDVSDADSI
EAGLADVLDR TGGTLDALFN NAGFGLPGLV EDLPTDALRA TFETNVFGLH HLTRAVIPTM
RRQGHGRIVQ HSSGFGRHVM KWRGAYNASK HAVEGLTDTL RLEMRGTGIH ISTLNTGPVT
SKFRLNSIPQ FERWIEWEAS ADPDRYKREL FRHLYEDTGP APFQREPDAV VKRLIHAIEA
DAPRPRYHIT PAVHFAEALR RTLPQRLLDA IAVRL
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