| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0542 |
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| Symbol | |
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| ID | 3932983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 531280 |
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| End bp | 532209 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902887 |
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| Product | hypothetical protein |
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| Protein accession | YP_508484 |
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| Protein GI | 89053033 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3176] Putative hemolysin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGA GGGACGAAGG AAGACGAGGG CAAGTGACCG ATCTGAGTAC CCGAAATATT
TCGGCGCCCG CGCCGACCCG AGGGGCTGGA CCAGACGGCA CCTATGATCG CCGGTCGCTG
ACCTATGCCA ATTCCTTCCC CAGCCCCTTT GTGCGCGCCA CGATCAAGAC AATTGAATGG
ATGACGGGCA AGCTCACGAT CATTCGGCGC ATTCGCCAGT TTGAGAGTTT GGGCGAGTTC
AAAGGGCAGG CTTTTTGGCC CGCCACGATG CGGGTCATGG GAATTGATCT GCAAACACCC
GACAGCCAGC TCGACCGCAT CCCGTCCGAT GGGCCGGTCG TATTTGTGGC CAATCACCCC
CACGGGTTGG TCGACGGCAT GATCCTGGCC GACCTGATCG GGCGTCGGCG CGATGACTAC
CGCATTCTGA CCCGCGCGTT GTTGACGGGT ATTGATGAAG CGGCGGCGGG GTACATGATT
TCCGTGCCGT TCCCCCATGA GCCGGATTCT CAGCAGAAAA TGCTGGATAT GCGGGCGGCG
GCGATGGAGC ATTTGAAGGC CGGTGGCCTG ATCTCTCTGT TCCCATCCGG CGCCGTTGCG
GTTGCGGATC GGATGATGGG CAAGCCCATT GAGGGTGAGT GGAACGTGTT CACCGCCAAG
ATGATCCGCA ATTCCGGCGC GACCATTGTG CCGTGTTTCT TCACGGGGCA GAACAGCCGT
GCCTATCAGA TCGCCAACCG CATCAGCCCG GTGATCCGCC AGGGTCTGTT GATCCACGAG
GTCGTCAAAA GTTTCGACAA GCCGCAAGCG CCGGTCATCG GTAAGCCGAT CACCCCGGAT
GAATGGGCTG ACCGGATCGG CAAGCCCCGC GAATTCATGG CGTGGCTGCG GGAGCGGACG
TTGTCGCTTG GGGACAATCC CGACCAGTAG
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| Protein sequence | MAMRDEGRRG QVTDLSTRNI SAPAPTRGAG PDGTYDRRSL TYANSFPSPF VRATIKTIEW
MTGKLTIIRR IRQFESLGEF KGQAFWPATM RVMGIDLQTP DSQLDRIPSD GPVVFVANHP
HGLVDGMILA DLIGRRRDDY RILTRALLTG IDEAAAGYMI SVPFPHEPDS QQKMLDMRAA
AMEHLKAGGL ISLFPSGAVA VADRMMGKPI EGEWNVFTAK MIRNSGATIV PCFFTGQNSR
AYQIANRISP VIRQGLLIHE VVKSFDKPQA PVIGKPITPD EWADRIGKPR EFMAWLRERT
LSLGDNPDQ
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