Gene Jann_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0539 
Symbol 
ID3932980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp529625 
End bp530581 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content63% 
IMG OID637902884 
Producthypothetical protein 
Protein accessionYP_508481 
Protein GI89053030 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCAC CTAACTCCGC GCCCCCTGCC CAAGTGGTCT TCGTCACCGG CCCGTCCGGT 
GCGGGACGCA GCACCGTGAT CAATGCGCTC GAAGATCTCG GGTTTGAAGC GATCGATAAT
CTGCCTCTCA GCCTCCTACC CCGGCTTCTT GAAGGGGCCC CGCCGGACCG CCCTTTGGCA
CTGTGCATTG ATCCGCGAAC CAGGGATTTT GACGCCCGCG ACCTCATCCA CGCCTATGAG
AAGTTGGAGC AGGACCCGGC CTACACCGCA GATCTTGTCT TTATTGACTG TGAACCGGCC
ACCTTGCAGC GCCGATACTC CGAGACGCGC CGCCGCCACC CGCTTGCGCC TGACGCGGAC
CCCGCCGATG GCATCGCGAT AGAACGGGAA ATGCTGGCCC CGCTGCGGAC GCGCGCGGAT
GTGTTGATCG ACACCACGCC CCTCACGGTC CACCGCACCC GAGATGAGGT CATCCGGTTA
TTCGCACTGG ACCGCGCGCC TGCGATGTCG ATCCAGATCA TGTCGTTTTC CTACAGGCGG
GCGCTGCCGA TCAGTGCCGA TCTCGTGTTT GATTGCCGTT TTCTGCGCAA TCCCCATTGG
GCTCCGGAGT TGCGTGCCAA GGATGGTCGC CAGTCTGACG TGCAGGCGTA TGTTGCCCAG
GACGCGCGGT TTGAGGCGTT CCGAACGCAG ATCAACGCCA TGCTTGATCT GTTGCTTCCG
GCCTTCAAGG AAGAGGGGAA GAGCCATCTG ACGGTTGCGT TTGGGTGTAC CGGTGGTCGC
CACCGCTCTG TCACCCTGGC CGAGTTGACC GCGCGCCGCC TTGCAGAGGA GGGGTGGCAG
GTGTCAAAAC GACATAGGGA CGTGGACAAG GACGCGTCTG AGAACAGCGA CCGAGATCGC
GGTGCCAGCG CTAGGACCGC CGCCTCGACT GACGATGGAG AGGCAGAACA ACCGTGA
 
Protein sequence
MPPPNSAPPA QVVFVTGPSG AGRSTVINAL EDLGFEAIDN LPLSLLPRLL EGAPPDRPLA 
LCIDPRTRDF DARDLIHAYE KLEQDPAYTA DLVFIDCEPA TLQRRYSETR RRHPLAPDAD
PADGIAIERE MLAPLRTRAD VLIDTTPLTV HRTRDEVIRL FALDRAPAMS IQIMSFSYRR
ALPISADLVF DCRFLRNPHW APELRAKDGR QSDVQAYVAQ DARFEAFRTQ INAMLDLLLP
AFKEEGKSHL TVAFGCTGGR HRSVTLAELT ARRLAEEGWQ VSKRHRDVDK DASENSDRDR
GASARTAAST DDGEAEQP