| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0536 |
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| Symbol | |
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| ID | 3932977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 526694 |
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| End bp | 527395 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637902881 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_508478 |
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| Protein GI | 89053027 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGTA TCGCACTTGT CGATGACGAC AGGAATATCC TGACGTCCGT ATCGATGACC
CTTGAGGCAG AGGGTTTCGA TGTTGAAACA TATAATGATG GTCAGTCCGC CCTGGACGCC
TTCAACCGCA AACTCCCGGA TCTGGGTGTC TTTGACATCA AGATGCCGCG GATGGATGGA
ATGGATCTTT TGCAGCGTTT GCGCACCAAG TCGCAGATGC CAGTGATCTT CCTCACCTCC
AAAGACGATG AGATTGATGA GCTGATGGGC CTGCGGATGG GCGCGGACGA TTACGTGCGC
AAGCCGTTTT CGCAGCGTCT GTTGGTGGAG CGTATCCGCT CGATCCTCCG TCGCCAGGAC
GCGATTGCAT CTGACGCCGC AGGCGCACCC GAGGAAAGCA CGGTGCTGGA CCGGGGTGAT
CTGCAAATGG ATCCCCTGCG CCATGCAGTG ACGTGGAAGG GGCGCGATGT AACCCTGACG
GTCACGGAAT TTCTGTTGTT GCAGGCGCTT GCACAGCGTC CGGGCTTCGT CAAATCGCGC
GATCAGCTGA TGGACGTCGC CTATGATGAA CAGGTCTATG TCGACGACCG CACCATCGAT
AGCCACATCA AGCGGCTGCG CAAGAAGATG CGGTCCGTCG ACAATGATTT CTCAGCGATT
GAGACACTCT ACGGCATTGG CTACCGCTAC AACGAAGAAT AG
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| Protein sequence | MARIALVDDD RNILTSVSMT LEAEGFDVET YNDGQSALDA FNRKLPDLGV FDIKMPRMDG
MDLLQRLRTK SQMPVIFLTS KDDEIDELMG LRMGADDYVR KPFSQRLLVE RIRSILRRQD
AIASDAAGAP EESTVLDRGD LQMDPLRHAV TWKGRDVTLT VTEFLLLQAL AQRPGFVKSR
DQLMDVAYDE QVYVDDRTID SHIKRLRKKM RSVDNDFSAI ETLYGIGYRY NEE
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