| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0514 |
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| Symbol | |
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| ID | 3932955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 507462 |
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| End bp | 509630 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902859 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_508456 |
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| Protein GI | 89053005 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGCGG ATGGCAGGCC AGCAGACGAG ACGGTCGCAG AGGATGCGAT TACCGTCGAC
GATCTGCTAA GCCTCGTCCG CAACTACAAC CCCAAAGCCC GTGAAAGCCT GATCCGTGAC
GCCTTCGCCT ATGGCGCGCG GATGCATGAC GGGCAGACCC GCCATTCCGG TGAGCCGTAT
TTCACCCACC CCGTGGCCGT CGCCGCCATC CTGACAGAGC AGCAGCTGGA CGATGCCACC
ATCGTCACGG CTCTTCTGCA CGACACGATT GAAGACACGC GGTCGACCTA CGGGGAAGTG
GCCAAGCATT TCGGGCCCGA GATCGCAGAG CTGATCGACG GCGTCACGAA GCTGACAAAC
CTGCAATTGA GCAACCGCGA GAGCAAGCAG GCGGAAAATT TCCGCAAGCT GTTCATGGCG
ATGTCCAAGG ATCTGCGGGT CATCCTGGTG AAGCTGGCCG ACCGGCTGCA CAACATGCGC
ACGATCCGCC ACATGCGCCC CGACAAGCAG AAGCAGAAGG CGCAGGAGAC GATGGATATC
TATGCGCCGC TGGCCGGTCG TATGGGTATG CACTGGATGC GCGAAGAGTT GGAGGACCTG
TCGTTTCGGG TCCTGAACCC GGAGGCGCGA TCATCGATCC TGCGCCGCTT CATCACGCTG
CAAAAGGAAA CCGGCGACGC GATCCCGAAG ATCAGCGACG ACATTGAGAC GGTACTGAAC
AAACGCGGCG TACACGCGGA CGTTTATGGC CGTGCGAAAA AGCCCTATTC GATCTGGCGC
AAGATGCAGG AGAAGAAGCT GGCCTTCTCG CGCCTGTCGG ACATCTACGG CTTCCGCGTG
ATCACCGAGA CCGAAGATGA CTGCTACCGG GTGCTTGGCG CTATTCACCA GCGGTGGAAA
TCCGTGCCGG GGCGGTTCAA GGATTACATC AGCCAGCCGA AGTCGAACGG CTATCGCTCC
ATCCACACCA CGGTCAGCGG GCGCGATGGC AAGCGGGTGG AGGTGCAGAT CCGCACCTAT
CAGATGCATG AAGTAGCCGA GGCGGGCGTG GCCGCCCATT GGGCGTACCG TGACGGTGTG
CGGACCCAGA ACCCTTTCGC GGTCGATCCC ACCAAGTGGC TGGAAAGCCT GACCGAGCGG
TTCGAGAACG CCGAGGACAC CAACGAGTTC CTCGAACATG TGAAGCTGGA AATGTACTCG
GACCAAGTGT TCTGCTTCAC GCCCAAAGGC GACGTGGTCA AGCTGCCGCG CGGGGCGACG
CCAATTGATT TCGCTTATTC GATCCACACG CGGATCGGGC ATTCCTGCGT CGGTGCAAAG
GTGGATGGGC TGCGCGTGCC CCTGTGGACG CGGCTGAAGA ACGGGCAATC GGTCGATATC
ATCACTGCGG AGGGGCAGAC GCCGCAAGCG ACCTGGATCG ATATTGCCAC CACGGGCCGC
GCCAAGGCGG CGATCCGGCG GTCTCTGCGC GAGGTGGACC GGGATCGCTA CATCAAGCTG
GGGCGGGAAT TGGCCCGCGT CGCGTTTGAA CAGATCGGCA AGAAAGCCAC GGACAAGGCT
TTGGCAACAG CGGCCAAAGC CCTAGTACTG AGTGACGGGG ATGAGGTGCT GGCGCGCATC
GGTTCGGCTG AACTGAGCGC GCGGCAGGTG GTGGCGGAGC TGTATCCGGA GCTGGCCAAT
CCCGACGATG CGTCGGCCAT TGAAGGCGCC CGCGCCGTCA TCGGCCTGCC GCCCGGCGCG
CGCATCCTTC GCGCCCAATG CTGCCAGCCG GTGCCCGGAG AGCGGATCGT GGGCATTACG
TACCACGGCA AGGGGCCGAT CCTGCATTCC ATCGACTGCC CCGCCTTGGC CGCGTTCGAC
GACCAGCCGG ACCGCTGGAT TGACCTGCAC TGGACCGAAG GCCGCCACGC GTCGATCCAC
AACGTCACGG CGAATGTGAC GCTGTCGAAT GAGAATGGCG TGCTGGGGCG CATTTGCACC
CTGATCGGGG AGCAGAACGC GAATATCTCG GACCTGCACT TCATTGACCG CAAGCCGGAT
TTCTTCCGTA TTCTCATTGA TATGGACGTC CGGGACGCCG AACATCTGCA CGCCGTGATG
ATGGCCGTGG AGGCAGATTC GGATGTTGCC GCATTAGATC GCTTCCGTGA TCTGGACCGG
AGGCCCTAA
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| Protein sequence | MAADGRPADE TVAEDAITVD DLLSLVRNYN PKARESLIRD AFAYGARMHD GQTRHSGEPY
FTHPVAVAAI LTEQQLDDAT IVTALLHDTI EDTRSTYGEV AKHFGPEIAE LIDGVTKLTN
LQLSNRESKQ AENFRKLFMA MSKDLRVILV KLADRLHNMR TIRHMRPDKQ KQKAQETMDI
YAPLAGRMGM HWMREELEDL SFRVLNPEAR SSILRRFITL QKETGDAIPK ISDDIETVLN
KRGVHADVYG RAKKPYSIWR KMQEKKLAFS RLSDIYGFRV ITETEDDCYR VLGAIHQRWK
SVPGRFKDYI SQPKSNGYRS IHTTVSGRDG KRVEVQIRTY QMHEVAEAGV AAHWAYRDGV
RTQNPFAVDP TKWLESLTER FENAEDTNEF LEHVKLEMYS DQVFCFTPKG DVVKLPRGAT
PIDFAYSIHT RIGHSCVGAK VDGLRVPLWT RLKNGQSVDI ITAEGQTPQA TWIDIATTGR
AKAAIRRSLR EVDRDRYIKL GRELARVAFE QIGKKATDKA LATAAKALVL SDGDEVLARI
GSAELSARQV VAELYPELAN PDDASAIEGA RAVIGLPPGA RILRAQCCQP VPGERIVGIT
YHGKGPILHS IDCPALAAFD DQPDRWIDLH WTEGRHASIH NVTANVTLSN ENGVLGRICT
LIGEQNANIS DLHFIDRKPD FFRILIDMDV RDAEHLHAVM MAVEADSDVA ALDRFRDLDR
RP
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