Gene Jann_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0492 
Symbol 
ID3932933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp490688 
End bp491410 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content62% 
IMG OID637902837 
Productacetoacetyl-CoA reductase 
Protein accessionYP_508434 
Protein GI89052983 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGAG TCGCACTGGT CACCGGCGGA AGCCGCGGCA TTGGCGAAGC CATTTCCAAG 
GCCCTGCAAG CCGACGGCTA TACCGTCGCC GCCACCTATG CGGGCAACGA CGAGGCCGCC
GCCAAGTTCA CCGACGCCAC GGGCATCAAG ACCTACAAGT GGAACGTTGC CGACTATGAC
AGCTCCAAAG CAGGCATCGA ACAGGTCGAA TCGGATCTTG GCCCCATCGA GGTTGTCGTC
GCCAACGCAG GCATCACCCG CGACGCCCCG TTCCACAAAA TGACGCCCCA GCAGTGGAAT
GAGGTGATCG ACACCAACCT GACCGGCGTG TTCAACACCG TGCACCCGAT CTGGCCCGGC
ATGCGCGAGC GGAAGTTTGG CCGCGTTATC GTGATCTCTT CAATCAACGG CCAGAAGGGT
CAGTTCGCAC AAACAAACTA TGCCGCCACG AAAGCGGGCG ATCTCGGCAT CGTGAAGTCT
CTGGCCCAGG AAGGCGCGCG CGCCGGCATC ACCGCCAACG CGATCTGCCC CGGCTATATT
GCGACGGAAA TGGTCATGGC GATCCCGGAG AAGGTACGTG ACAGCATCGT CGCGGGCATT
CCTGCCGGTC GTCTGGGCGA GCCAGAGGAA ATCGCACGCT GCGTCTGCTT CCTGGCGTCG
GACGATAGCG GGTTCATCAA CGGCTCGACC ATCTCGGCCA ACGGTGCGCA ATTCTTCGTC
TAA
 
Protein sequence
MGRVALVTGG SRGIGEAISK ALQADGYTVA ATYAGNDEAA AKFTDATGIK TYKWNVADYD 
SSKAGIEQVE SDLGPIEVVV ANAGITRDAP FHKMTPQQWN EVIDTNLTGV FNTVHPIWPG
MRERKFGRVI VISSINGQKG QFAQTNYAAT KAGDLGIVKS LAQEGARAGI TANAICPGYI
ATEMVMAIPE KVRDSIVAGI PAGRLGEPEE IARCVCFLAS DDSGFINGST ISANGAQFFV