| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0485 |
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| Symbol | |
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| ID | 3932926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 484009 |
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| End bp | 485709 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902830 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_508427 |
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| Protein GI | 89052976 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTGA CACGACCAAT TTTTGCCCTT GCCCTGGCGG CGTTGATTTC GCCGCTCACG
GCCCCGGGAT CGGCCCAGGC TGACAGTCTG GCAGGGGCGT ATCTTGCGGG CCGCTCGGCC
GCGATCACCG GTGATCATGC GCAGGCGGCG ACGTATTTTG ACCGCGCGAT ACAGCTTGAT
CCCGGCAACG CCTTTCTGGT GAGCAATTCG GTCTTTGCCC ATGCTTCCCT GGGGGAGTGG
GCGGCGGCAG CGGAGGTTGC AGAAGGTCTG CCGGACGGAG CCGAGGGGCA GGAGCTGGTC
GCCCTGGTCG ACTTTGTGCG CCACGTTTCG GAAGATCGTT TGCAAGAGGC CATTGATATG
ATCGAGGCCG GGGACGGTCC CGGTCCGCTG GCCGATGATC TGGCCCGCGC CTGGCTGACC
TTTGGACAGG GCGACATGTC CGGCGCGGTC GACACGTTTG AGGCGCTGGC GTCCGAGCGT
GGGCTGGAAG AGCTGGCCGC GCTGCATCTG GCCCTGGCGC GGGCAGCCGT GGGCGATTTT
GAGGCCGCGC ATGAGATCCT GTCCGGCGGA ACCGGTGTCC AGATCTCCAA CACCGAACGG
GTGGTGCGCG CGCGTGCCGT CGTCATGTTG CAACTGGATA TGCGGGCCGA GGCGCTGGAC
CTGCTGGACG GCTATACCCA GGCCGTGCCG GACCCGGGCC TTCTGGCGTT GCAGGCGCGT
GTCGGCTCTG GCGAGGATGT GCCGTATGAC TTTGTGAACA CCGCCCAGGA TGGCGTGGCC
GAGGTGTTTT TCACCGTGGC GCAACTGCTG GCGGGGGACC GCAACACAAC GTTGCCGCTG
CTGATGGCGC AGGCTGCGCG CGGGATCGAC CCGGATCATA CCGACGCCAT GGTCCTGGCC
GGAGAGTTCA TGGGCGCGAC CGAGCAATTT CAGCTGGCCG CCGCAACCTA CGGCGAGGTT
CCCGAAGACG ATCCGAACTA CATCGAGGCC CAGATGGGCC GAGCCGAAGC GCTGGAATCT
CTGGGCCAGG AAGAGGAGGC GATCGGCATT CTGGCGGACC TCGCCGCCGC GCGCCCGGAC
CTGGCCTCCG TGCAAGCCGC CTATGGCGAT ATCCTGCGGC GTGATGAGCA GTTTGAGGGG
GCGATTGAGG CGTATACGGC GGTCCTTGAC CTCGTGGATG CGGACCAGCC CCGCTATTGG
TTCATCCACT ATGCGCGCGC GATCAGCTAC CACCAGACGG ACAATTGGGA TCCGGCAGAG
GCTGACTTCC GGCGCGCATT GGAGTTGAAC CCTGAACAAC CCAACGTGTT GAACTATCTG
GGCTATTCGC TGGTCGAACA GCGCCGCAAC TTCGATGAGG CCTTGGGCAT GATCCAGCGC
GCCGTCGCGG CCCGGCCCGA AAGCGGCTAC ATTATCGACA GCCTCGGATG GGTTTATTAC
CGCCTTGGCC GTTTCGAGGA GGCCGTGGCA CCTATGGAAC GTGCGGTTGA GCTTGAGCCC
AACGATCCCA TCGTCAACGA TCATCTGGGC GACGTCTATT GGGTCAATGG CCGGTACCGC
GAGGCGGAGT TCCAGTGGCA CCGCGCGTTG TCTTTTGATC CCGAGGAGGA GGACGCCGTG
CGGATCCGGC GCAAGCTGGA AGTCGGCCTT GACGTTGTGC TGGAGGAAGA AGGCGGCGTG
GGCGTTCTGG AAGAAGAGTG A
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| Protein sequence | MRVTRPIFAL ALAALISPLT APGSAQADSL AGAYLAGRSA AITGDHAQAA TYFDRAIQLD
PGNAFLVSNS VFAHASLGEW AAAAEVAEGL PDGAEGQELV ALVDFVRHVS EDRLQEAIDM
IEAGDGPGPL ADDLARAWLT FGQGDMSGAV DTFEALASER GLEELAALHL ALARAAVGDF
EAAHEILSGG TGVQISNTER VVRARAVVML QLDMRAEALD LLDGYTQAVP DPGLLALQAR
VGSGEDVPYD FVNTAQDGVA EVFFTVAQLL AGDRNTTLPL LMAQAARGID PDHTDAMVLA
GEFMGATEQF QLAAATYGEV PEDDPNYIEA QMGRAEALES LGQEEEAIGI LADLAAARPD
LASVQAAYGD ILRRDEQFEG AIEAYTAVLD LVDADQPRYW FIHYARAISY HQTDNWDPAE
ADFRRALELN PEQPNVLNYL GYSLVEQRRN FDEALGMIQR AVAARPESGY IIDSLGWVYY
RLGRFEEAVA PMERAVELEP NDPIVNDHLG DVYWVNGRYR EAEFQWHRAL SFDPEEEDAV
RIRRKLEVGL DVVLEEEGGV GVLEEE
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