| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0481 |
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| Symbol | |
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| ID | 3932922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 479396 |
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| End bp | 480661 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637902826 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_508423 |
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| Protein GI | 89052972 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATT TTCTCTACAA GAACGGCGCG CTCCACGCCG AAGATGTGCC CGTGGCCGAC
ATCGCCGCCA GCGTCGGCAC GCCCTTCTAC GTCTATTCCA CCGCCACCCT TACGCGCCAC
TTTCAGCTGT TTGAAGAGGC GCTGGGGGGT ATGGATCACC TCATCTGCTT TGCGGTGAAA
AGCAATTCAA ATCAAGCAGT TCTGTCCCAT ATGGCCATGC TCGGCGCGGG GATGGATGTG
GTGTCTGGCG GGGAGTATTT GCGCGCCAAG GCGGCGGGCG TGCCGGGTGA CAAGATCGTC
TTTTCCGGCA TCGGTAAGAC CGAAGATGAA ATGCGCCTGG CGCTGAATGG CGGCATCCGT
CAGTTCAACG TGGAATCGGA ACCGGAGATG CACCGCTTAT CCCGCGTTGC CACCGCGCTC
GGCGTCACCG TCCCCATCAC CGTGCGCGTG AACCCGGATG TGGATGCGAA GACCCACGCC
AAGATCGCCA CGGGCCGGAA GGAGGACAAG TTCGGCATCC CGATTGCCCG TGCGCGGGAG
GTCTACGCCC TCGCCGCCTC CCTTCCCGGA CTGCAAGTCA TTGGAATCGA TGTCCATATC
GGGAGCCAAC TGACCGATCT GGAACCTTTT GAGATCGCCT ATGCCAAAGT CGCAGAACTG
ACCGAACAAC TGCGCGAAGA TGGCCATACC ATTACCCGGC TCGATCTCGG CGGCGGGCTT
GGCATCCCCT ATGAGCGTTC CAACTCCGCG CCGCCTCTGC CGATTGAATA TGGGGAGGTC
ATCAAGCGCA CCGTCGGTCA TCTGGGCTGT GAGATCGAGA TTGAACCGGG GCGTCTGATT
TCCGGGAACG CGGGGCTTCT GGTGGCCTCA ACTATCTACG TAAAGCACGG AGAAGACAGA
GATTTCTTGA TCCTCGATGC GGCGATGAAC GACCTGATCC GCCCCGCCAT GTACGGCGCG
TATCACGACA TCATTCCGGT GGTGGAGCCC GCGCCCGGCG CTGAACAATC GCCCTATGAT
ATCGTCGGGC CGGTCTGCGA AAGCGGCGAC ACCTTCGCCA AGCAGCGCGA TCTGCCGCCC
GTCAAAGAGG CCGATCTGAT CGCCTTCCGC TCCGCCGGTG CCTACGGCGC GGTGATGTCG
TCGGAATACA ACACACGGCC TCTCATCCCG GAGGTTCTGG TGAATGGCGA TCAATTCGCC
GTCATCCGCG CGCGTCCATC GTTTGACGAC ATGATAAACC GCGATACACT CCCCCAATGG
ATGTAG
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| Protein sequence | MDHFLYKNGA LHAEDVPVAD IAASVGTPFY VYSTATLTRH FQLFEEALGG MDHLICFAVK
SNSNQAVLSH MAMLGAGMDV VSGGEYLRAK AAGVPGDKIV FSGIGKTEDE MRLALNGGIR
QFNVESEPEM HRLSRVATAL GVTVPITVRV NPDVDAKTHA KIATGRKEDK FGIPIARARE
VYALAASLPG LQVIGIDVHI GSQLTDLEPF EIAYAKVAEL TEQLREDGHT ITRLDLGGGL
GIPYERSNSA PPLPIEYGEV IKRTVGHLGC EIEIEPGRLI SGNAGLLVAS TIYVKHGEDR
DFLILDAAMN DLIRPAMYGA YHDIIPVVEP APGAEQSPYD IVGPVCESGD TFAKQRDLPP
VKEADLIAFR SAGAYGAVMS SEYNTRPLIP EVLVNGDQFA VIRARPSFDD MINRDTLPQW
M
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