| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0479 |
|---|
| Symbol | |
|---|
| ID | 3932920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 475951 |
|---|
| End bp | 476775 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637902824 |
|---|
| Product | Zinc finger/thioredoxin putative |
|---|
| Protein accession | YP_508421 |
|---|
| Protein GI | 89052970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTAA CATGCCCGAA TTGCAGCGCA AGATATGAAG TCGATGAAGA CATGGTGCCT
GCGTCCGGGC GCGATGTGCA ATGCTCGAAT TGCTCCCAAA CCTGGTTTCA GCCCGGTCCG
CGACGGACGG AACCGAAGGC GCCTGAGCCA GAGACGGACG CACCAGAGGT CGAAACGGCT
CAGGAGGAGC CTCGTCTGGC GGAAGTGTCC GTTGACGGTC CAAGTGGTGC CCCGGGGGAG
GAGGCGACTG AGGACGAGCC GCGCCCCGCG CGCCGTCAGA TTGACCCGAA TGTGACCGAT
ATCCTGCGCG AAGAGGCTGA GCGCGAGGCG CGGTTGCGCC GGAGCGATCC CGCGCCTGAT
CCGGCCCCTC AGCAAGAAGA GATGCCCCTG ACAGAGGAGC CGTCCACCCA GAGAGAGCGT
CGCCTTGCGG ACCTGGAAGG CGCGGCGGAT GCGTTTGATA CGGACCAGAT CACAGCCGCT
GTGGCAACCG CAGCCGCAGC GTCGCGGAGA GAGCAATTCC CCGACATCGA AGAGATCAAT
TCGACCCTGC GCGCCACGGG CGACCGCCAT GAAGGTGCCG AAGACGGCAC GGATGTGGAC
ACTGTCAGCG CAGCCAGTCG CAGGCGTGGG TCTGTGCGGC GCGGGTTCTT TTCGGTCATT
CTCCTCGCGT GTATTGCCGT GGGCATCTAC GCCTATGCGG GTCAGATCGC GGAGGCTGTT
CCGCAACTTG GCCCCGCGTT GGAGCAATAT GTCGATGCGG TCAATTCCGC GCGCTTCTGG
CTGGATGATA TGGCCCGATC TCTGGCCGGT GAAACGGGCA ACTAG
|
|---|
| Protein sequence | MRLTCPNCSA RYEVDEDMVP ASGRDVQCSN CSQTWFQPGP RRTEPKAPEP ETDAPEVETA
QEEPRLAEVS VDGPSGAPGE EATEDEPRPA RRQIDPNVTD ILREEAEREA RLRRSDPAPD
PAPQQEEMPL TEEPSTQRER RLADLEGAAD AFDTDQITAA VATAAAASRR EQFPDIEEIN
STLRATGDRH EGAEDGTDVD TVSAASRRRG SVRRGFFSVI LLACIAVGIY AYAGQIAEAV
PQLGPALEQY VDAVNSARFW LDDMARSLAG ETGN
|
|---|
| |