| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0458 |
|---|
| Symbol | |
|---|
| ID | 3932899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 459549 |
|---|
| End bp | 460667 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637902803 |
|---|
| Product | L-alanine dehydrogenase |
|---|
| Protein accession | YP_508400 |
|---|
| Protein GI | 89052949 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATCG GATGCCCCAC AGAGATCAAA CCGCAGGAAT TTCGTGTCGG GATCACGCCC
GCCGCCGCGC GCGAGGCCGT CGTTCACGGC CACCGGGTGA CCATGCAGGC CGGGGCTGGC
ACGGGCGCTG GCTTCACGGA TGAGGATTAC ACCGCAGCAG GGGCAGAGAT CGCCGCCACG
GCCAAGGACG TTTTCGCCGC GGCCCAGATG ATCGTTAAGG TCAAGGAACC CCAAGCCGTT
GAACGCGCCA TGCTGCGTAA GGGTCAGATC CTGTTCACTT ACCTCCACCT TGCGCCCGAT
CCCGACCAAA CCGCCGACCT TCTGCAAAGC GGCGTCACGG CCATCGCCTA TGAAACGGTG
ACGGACCGCA CCGGCGGCCT GCCCCTGCTG GCCCCTATGT CGGAGGTCGC GGGACGGTTG
GCACCTCAGG TTGGGTCCTG GGCGCTGCAA AAGGCCAACG GGGGGGGCGG CGTGCTGATG
GGCGGTGTCC CCGGGGTTGG TCCGGCGGAG GTCGTCGTGA TTGGCGGCGG CGTTGTCGGC
ACGCAGGCAG CGCGTGTGGC GGCCGGTATG GGCGCGGATG TTACCATCCT TGATCGCTCG
CTCCCACGTC TGCGGTATCT GGATGATGCC TATCGCGGTG CGTTCAAGAC GCGTTACGCC
AGCGCCGATG CAACAGCGCA ACTGATCACG ACAGCGGATA TGGTCATCGG TGCGGTTCTG
ATCCCCGGAG CTGCGGCGCC CAAACTGGTG ACGAAGGACC AACTGTCGAC GATGAACCCG
GGCGCTGTCA TCGTCGACGT CGCCATCGAT CAGGGTGGAT GCTTTGAGAC GTCGAAGGCC
ACCACCCATC AAGACCCGAT CTATGAGGTC GATGGCGTCG TCCACTATTG TGTTGCCAAC
ATGCCCGGTG CAGTGGCCCG GACCTCAACG CTTGCGCTTG GCAATGCCAC CATGCCCTTC
ATGCTGGCGC TGGCCGATAA GGGTTGGAAA CAGGCCTGCG CCGATGATCC GCATCTGCTG
GAGGGTCTGA ACACCCATGA GGGCAAGCTG ACCAACTACG CCGTGGGCAT GGCCCTGGGG
CTTGATGTGC TATCCCCGTC ACTCGCGATC AAAGGCTAG
|
|---|
| Protein sequence | MHIGCPTEIK PQEFRVGITP AAAREAVVHG HRVTMQAGAG TGAGFTDEDY TAAGAEIAAT
AKDVFAAAQM IVKVKEPQAV ERAMLRKGQI LFTYLHLAPD PDQTADLLQS GVTAIAYETV
TDRTGGLPLL APMSEVAGRL APQVGSWALQ KANGGGGVLM GGVPGVGPAE VVVIGGGVVG
TQAARVAAGM GADVTILDRS LPRLRYLDDA YRGAFKTRYA SADATAQLIT TADMVIGAVL
IPGAAAPKLV TKDQLSTMNP GAVIVDVAID QGGCFETSKA TTHQDPIYEV DGVVHYCVAN
MPGAVARTST LALGNATMPF MLALADKGWK QACADDPHLL EGLNTHEGKL TNYAVGMALG
LDVLSPSLAI KG
|
|---|
| |