Gene Jann_0457 details

Gene Information

• Locus tag: Jann_0457
• Symbol: mscL
• ID: 3932898
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 458997
• End bp: 459488
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637902802
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_508399
• Protein GI: 89052948
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGTGCGAAT GCGCACGAAA ATCAATCCCT TGCGAACAGG AACTGAAAGA TTGGGACACT 
CACATGATTA ACGAATTCAA GGACTTCATT GCCAAGGGCA ATGTGATGGA CATGGCCGTC 
GGTATCATTA TCGGCGCGGC ATTCACCGCA ATCGTCACCT CGCTGGTGGG CGATCTGATC 
AATCCGATCA TCGCACTGTT TACCGGTGGC ATGGATTTCT CGGGATGGTT CTATGTGCTG 
GGTGACGGCG AATGCGCGTC GGTCGCGGCC TGTACGGAGG CAGGGATTTC CGTCTTTGCC 
ATCGGCAACT TCCTGATGGC GATCATCAAC TTCCTGATCA TCGCCTTCGT TGTCTTCATG 
CTGGTGAAGA TGGTCAACCG TGTGAAAGCT GCCGCAGAGA AGCCCGATGA GGTTGCCCCA 
GAGGTGGAGA CGGGCCCGTC CGAGATCGAC CTGCTGATCG AGATCCGCGA TGGCTTGAAG 
GCCCGCGGCT AA 

 

Protein sequence

MCECARKSIP CEQELKDWDT HMINEFKDFI AKGNVMDMAV GIIIGAAFTA IVTSLVGDLI 
NPIIALFTGG MDFSGWFYVL GDGECASVAA CTEAGISVFA IGNFLMAIIN FLIIAFVVFM 
LVKMVNRVKA AAEKPDEVAP EVETGPSEID LLIEIRDGLK ARG