Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0451 |
Symbol | rplT |
ID | 3932892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 453200 |
End bp | 453559 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637902796 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_508393 |
Protein GI | 89052942 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTA CCAAAGGTGG AACCGTCACT CACCGTCGCC ACAAGAAAGT CATCGATGCC GCCAAAGGTT ACTATGGCGC GCGTTCGACG AACTTCCGCA CCGCGACTCA GGCCGTCGAC AAGGCCAACC AATACGCCAC ACGCGACCGC AAGAACCGCA AGCGCCAGTT CCGCGCGTTG TGGATCCAGC GGATCAACGC GGCTGTGCGT CAACATGACG AAGCGCTGAC ATATTCGCGC TTCATCAACG GTCTGGCGAA AGCCGGGATC GAAGTGGACC GGAAGGTCCT GGCGGATCTG GCCGTGCACG AGCCCGACGC CTTTAGCGCC ATCGTGGATC AGGCGAAGGC CGCGCTCTAA
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Protein sequence | MSRTKGGTVT HRRHKKVIDA AKGYYGARST NFRTATQAVD KANQYATRDR KNRKRQFRAL WIQRINAAVR QHDEALTYSR FINGLAKAGI EVDRKVLADL AVHEPDAFSA IVDQAKAAL
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