Gene Jann_0451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0451 
SymbolrplT 
ID3932892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp453200 
End bp453559 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content61% 
IMG OID637902796 
Product50S ribosomal protein L20 
Protein accessionYP_508393 
Protein GI89052942 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTA CCAAAGGTGG AACCGTCACT CACCGTCGCC ACAAGAAAGT CATCGATGCC 
GCCAAAGGTT ACTATGGCGC GCGTTCGACG AACTTCCGCA CCGCGACTCA GGCCGTCGAC
AAGGCCAACC AATACGCCAC ACGCGACCGC AAGAACCGCA AGCGCCAGTT CCGCGCGTTG
TGGATCCAGC GGATCAACGC GGCTGTGCGT CAACATGACG AAGCGCTGAC ATATTCGCGC
TTCATCAACG GTCTGGCGAA AGCCGGGATC GAAGTGGACC GGAAGGTCCT GGCGGATCTG
GCCGTGCACG AGCCCGACGC CTTTAGCGCC ATCGTGGATC AGGCGAAGGC CGCGCTCTAA
 
Protein sequence
MSRTKGGTVT HRRHKKVIDA AKGYYGARST NFRTATQAVD KANQYATRDR KNRKRQFRAL 
WIQRINAAVR QHDEALTYSR FINGLAKAGI EVDRKVLADL AVHEPDAFSA IVDQAKAAL