| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0449 |
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| Symbol | |
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| ID | 3932890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 452214 |
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| End bp | 452816 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637902794 |
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| Product | exopolysaccharide synthesis, ExoD |
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| Protein accession | YP_508391 |
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| Protein GI | 89052940 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC CGCACCCACC CCTGGCCGAG GCCCCGCCTG CGTCCCTTCC CGACATTATC
GACCGGGTCC TGGACGCCGC CCGGGTAGAC GTCACCGATA TCCGCACGAT TTTGCAGTCG
TTTGGGCGGG CCAGCTTCAC GCCAGTGTTG CTCCTGCCCG CAATGGCGGT GGCAACCCCG
CTCAGTGGCA TCCCCCTGTT CTCGTCTTTC GCAGGGCTTC TGATTGCGCT GGTCTCTGCG
CAGATGCTGG CGCGGCGCAA TTATCTCTGG TTGCCGGACT GGATCCTTCG CCGCCAGATA
ACTGGGGGAA AGCTTCGGGC TGCCTTTGAA CGGATCCGCC CGGTCGCCGT CTGGATTGAC
GCGCGCACGG CACAACGGTT CCGCCTCCTG TCACGCCGAC CCCTTATCTT CCTGCCACAG
CTGTTGTGCC TCGTGTCCGG CCTGATGATG CCTGTGCTTG AATTTGTGCC GTTCTCCTCC
TCCGTCGTGG GGATCGGGGT GGCGATACTT GCCTTGGGGA TGCTGGCACG GGACGGCGCA
TTGATCGTTT TGGGACTGCT GCCTTATGCC GGTGTTGTGT GGTTGGTCTA CCGCGTGGTG
TGA
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| Protein sequence | MSEPHPPLAE APPASLPDII DRVLDAARVD VTDIRTILQS FGRASFTPVL LLPAMAVATP
LSGIPLFSSF AGLLIALVSA QMLARRNYLW LPDWILRRQI TGGKLRAAFE RIRPVAVWID
ARTAQRFRLL SRRPLIFLPQ LLCLVSGLMM PVLEFVPFSS SVVGIGVAIL ALGMLARDGA
LIVLGLLPYA GVVWLVYRVV
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