Gene Jann_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0436 
Symbol 
ID3932877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp440903 
End bp441679 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content64% 
IMG OID637902781 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_508378 
Protein GI89052927 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGG CCCTTCCACC TGAATTCCTC GACCGACCGC TGACCCATCG CGGTCTGCAT 
GACCGCAGTA AGGGCGTGAT CGAGAACAGT GCCGGTGCGG TCCGTGCAGC GGTGGCGCAC
GGCTACGGGA TTGAGATTGA CGTCCAGCTG ACCTCGGACG GGGCGGCGAT GGTGTTTCAC
GATGAGCGAT TGGATCGTCT GACGGGCGAA AGCGGCCCGA TCCGGGGATG GGCGGCGCGC
GATCTGGTGA ACCTCACGCT GACCGGATCA AGCGAAACGG TCCCGACGCT CCCGGAGGTG
CTGGAGATCG TGGGTGGCAG GGTGCCCTTG TTGATCGAGT TGAAAGACCA GTCCGGCGGC
ACCGGCTCTG CCCCCGATGA GTTGGAACGT GCAGTGGCGA AGGCGCTGGA GGGTTACGAA
GGCCTCGTCG CCGTCATGTC GTTCAACCCC CACATGGTCG CCAACATGGC CAAGCGCGCG
CCAAGCGTGC CGCGAGGGAT CGTGACCGAT GGCTATACCG AGACGGAATG GCCCGACCTG
TCGCCCGACA CCTTGCAAGC CCTGCGCGAA ATCGGTGCCT TTGATGCCGT TGGAGCCAGC
TTCATCAGCC ACAATTGGGA GGATTTGGCC GCCCCCCGCG TGGCAGAGCT GAAGGCCAGG
GGCGTGCCGA TCCTGTGCTG GACCGTGAAA TCGGCCGAGG ATGAGGCACA AGCGCGCCGC
GTGGCCGACA ACATCACGTT CGAGGGCTAC ACGCCCACGC CTCGCGCCAA GGATTGA
 
Protein sequence
MNPALPPEFL DRPLTHRGLH DRSKGVIENS AGAVRAAVAH GYGIEIDVQL TSDGAAMVFH 
DERLDRLTGE SGPIRGWAAR DLVNLTLTGS SETVPTLPEV LEIVGGRVPL LIELKDQSGG
TGSAPDELER AVAKALEGYE GLVAVMSFNP HMVANMAKRA PSVPRGIVTD GYTETEWPDL
SPDTLQALRE IGAFDAVGAS FISHNWEDLA APRVAELKAR GVPILCWTVK SAEDEAQARR
VADNITFEGY TPTPRAKD