| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0434 |
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| Symbol | |
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| ID | 3932875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 439065 |
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| End bp | 440372 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902779 |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_508376 |
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| Protein GI | 89052925 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGTG CCAAACGTCC CTCTTGGTCG GTGCGCGGCC CGATGCTGCT TGGCCTGATT
GCACTGCTGG TGCTGGTCGT CGGTTTCGGT GGCTGGTCCG TGTCCAGCAC GTTGTCCGGC
GCCGTCGTGG CATCCGGTCA GATTGAGGTT GATCGCAATC GTCAGGCGAT CCAGCACCCC
GATGGCGGCG TCGTGGCGGA GCTTTTGGTC GACGAAGGCG ACCGGGTGGG AGAGGCGCAG
GTTCTTGTCC GCCTAGACAC ATCAGAGTCG GAGACTGAGC TGGCCGTGGC TCGGGCGCGA
CTGGCTGAAA CCGCCGCTCG CCGTGTGCGC TTGCAGGCGG AGCGTGACGG GTTGGATCGC
CTCACCTTCT CGGAGGATCT GGTCGCGTTT GCGGCTGGCA ATCCGGAGAT TGCCGAGGTC
GTCGCGGGTC AGCGCAACCT TTTCGCCGCC CGCGCCGACA GTTTGGCACG CGAGGAGGAA
CAGCTGCGCG GCCGCATCAC CCAGATCGGC ACTCAGGTGG ATGCCATGCG CGCCCAGGAG
GAGGCTCTGG TCGAGCAGAT CACGTTGGTT GAGGACGAAC TGGTGCGCCG CGAAGATCTG
TTGGAGCGTG GATCCGGTAC GGTCGAACCC GTCGTGCGCC TGCGCCAGGA ATTGGTGCAA
CTGCGCGGGC AGCTTGGCCA AGCCACGGCA GGCCGCGCAG AGGCCGCTGA GCGGATCATC
GAGACGGAAC TGGCGATCCT GCAACTGACA ACTACCCAGC GTGAGCAGGC GATTTCCGAG
CTTCGGGAAC TTCGCGTGAC CGAGCAGGAA CTGGTTGAAC GCACCGCCAA TCTGGAACGC
CGAATTGCGC GCCTGGAATT GCGCGCGCCG GTCGCAGGCA CGATCCATGG GCTGACGATC
TTTGGCGCCC GCGCTGTCCT GCGTCCCGCA GACCCCTTCG CTTATATCGT GCCCGAGGGT
CGCCCGCTGG TCATTTCCGC CCGCGTGCCC GCCATCGATA TCGATCAGGT CTTTGAGGGA
CAAACGGTAT CCCTGACCTT CCCCGCGTTT GACCAATCCT CCATGCCCGA GGTGACCGGA
GAGGTGGCCC AGGTCTCTGC CGACGCTTTT GTCGATGAGG TCAGCGGCAG CAGTTTCTAC
CGGGCCGAGA TCACGATGAC GGAAGAGCAG GCGCAGCTTC TGGGCGCCCG CGTTCTGATC
CCGGGCATGC CGGTAGAAGC GTTTATCCGC ACCGAAGACC GGACGCCGCT GGCCTACCTG
TTGGAGCCGT TCACCACCTA TTTCTCCCGG GCATTCCGGG AAAGCTAA
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| Protein sequence | MSGAKRPSWS VRGPMLLGLI ALLVLVVGFG GWSVSSTLSG AVVASGQIEV DRNRQAIQHP
DGGVVAELLV DEGDRVGEAQ VLVRLDTSES ETELAVARAR LAETAARRVR LQAERDGLDR
LTFSEDLVAF AAGNPEIAEV VAGQRNLFAA RADSLAREEE QLRGRITQIG TQVDAMRAQE
EALVEQITLV EDELVRREDL LERGSGTVEP VVRLRQELVQ LRGQLGQATA GRAEAAERII
ETELAILQLT TTQREQAISE LRELRVTEQE LVERTANLER RIARLELRAP VAGTIHGLTI
FGARAVLRPA DPFAYIVPEG RPLVISARVP AIDIDQVFEG QTVSLTFPAF DQSSMPEVTG
EVAQVSADAF VDEVSGSSFY RAEITMTEEQ AQLLGARVLI PGMPVEAFIR TEDRTPLAYL
LEPFTTYFSR AFRES
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