Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0421 |
Symbol | |
ID | 3932862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 424521 |
End bp | 425309 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637902766 |
Product | exodeoxyribonuclease III |
Protein accession | YP_508363 |
Protein GI | 89052912 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTCA CTCTCGCCAC CTGGAACATC AACTCCGTCC GTCTGCGCCA ACCGATCGTG TCGCAACTCA TGACCGAGGA GGCGCCCGAC ATTCTGTGCC TTCAGGAATG CAAAAGCCCC GTCGACAAGA TGCCGTCCGA TGTCTTTGCA GCGCTTGGCT ACACCCATGT CGTGGCGCGT GGGCAGAAGG GCTACAACGG TGTGGCGATC TACTCCAAAC TCCCGATGGA GGAGGCCGGA TCCCATGAAT TCGCAGGCCT CGACCATGCG CGCCACATCG CCGGGCGGCT GGAAAACGGC GTCACCATCC ACAACTTCTA TGTGCCCGCG GGCGGCGACG TGCCGGACCG CGACGTGAAC ATCAAGTTCG GCCAGAAGCT CGACTACCTC ACCGATATGC GAGATTGGGC GAAGACGGAC ACACCGCAGA AATCCATCCT CTTGGGCGAC CTGAACATCG CACCCCGGGA AGATGACGTC TGGTCCCACA AACAATTGCT GAAAGTTGTA TCCCATACGC CCATCGAGGT GGAGCATTTG GCCGAGGCGC AGGACGCCGG GGGATGGGTC GACGTCACCC GCAAGGATAT CCCCGACGGG CCGCTATTCT CGTGGTGGTC CTACCGCTCG CCGGATTGGG ACAATGCCGA CAAGGGGCGT CGTCTCGATC ATGTGTGGGC CACGCCCGAT ATCTCCAATG CTGCGCATTC CTCCCGCATT GCCCGCCATG TGCGCGGGTG GGAAAAGCCG TCCGATCACG CCCCGGTTTT TGCGACTTTC GACCTCTGA
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Protein sequence | MPFTLATWNI NSVRLRQPIV SQLMTEEAPD ILCLQECKSP VDKMPSDVFA ALGYTHVVAR GQKGYNGVAI YSKLPMEEAG SHEFAGLDHA RHIAGRLENG VTIHNFYVPA GGDVPDRDVN IKFGQKLDYL TDMRDWAKTD TPQKSILLGD LNIAPREDDV WSHKQLLKVV SHTPIEVEHL AEAQDAGGWV DVTRKDIPDG PLFSWWSYRS PDWDNADKGR RLDHVWATPD ISNAAHSSRI ARHVRGWEKP SDHAPVFATF DL
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