Gene Jann_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0421 
Symbol 
ID3932862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp424521 
End bp425309 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID637902766 
Productexodeoxyribonuclease III 
Protein accessionYP_508363 
Protein GI89052912 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCA CTCTCGCCAC CTGGAACATC AACTCCGTCC GTCTGCGCCA ACCGATCGTG 
TCGCAACTCA TGACCGAGGA GGCGCCCGAC ATTCTGTGCC TTCAGGAATG CAAAAGCCCC
GTCGACAAGA TGCCGTCCGA TGTCTTTGCA GCGCTTGGCT ACACCCATGT CGTGGCGCGT
GGGCAGAAGG GCTACAACGG TGTGGCGATC TACTCCAAAC TCCCGATGGA GGAGGCCGGA
TCCCATGAAT TCGCAGGCCT CGACCATGCG CGCCACATCG CCGGGCGGCT GGAAAACGGC
GTCACCATCC ACAACTTCTA TGTGCCCGCG GGCGGCGACG TGCCGGACCG CGACGTGAAC
ATCAAGTTCG GCCAGAAGCT CGACTACCTC ACCGATATGC GAGATTGGGC GAAGACGGAC
ACACCGCAGA AATCCATCCT CTTGGGCGAC CTGAACATCG CACCCCGGGA AGATGACGTC
TGGTCCCACA AACAATTGCT GAAAGTTGTA TCCCATACGC CCATCGAGGT GGAGCATTTG
GCCGAGGCGC AGGACGCCGG GGGATGGGTC GACGTCACCC GCAAGGATAT CCCCGACGGG
CCGCTATTCT CGTGGTGGTC CTACCGCTCG CCGGATTGGG ACAATGCCGA CAAGGGGCGT
CGTCTCGATC ATGTGTGGGC CACGCCCGAT ATCTCCAATG CTGCGCATTC CTCCCGCATT
GCCCGCCATG TGCGCGGGTG GGAAAAGCCG TCCGATCACG CCCCGGTTTT TGCGACTTTC
GACCTCTGA
 
Protein sequence
MPFTLATWNI NSVRLRQPIV SQLMTEEAPD ILCLQECKSP VDKMPSDVFA ALGYTHVVAR 
GQKGYNGVAI YSKLPMEEAG SHEFAGLDHA RHIAGRLENG VTIHNFYVPA GGDVPDRDVN
IKFGQKLDYL TDMRDWAKTD TPQKSILLGD LNIAPREDDV WSHKQLLKVV SHTPIEVEHL
AEAQDAGGWV DVTRKDIPDG PLFSWWSYRS PDWDNADKGR RLDHVWATPD ISNAAHSSRI
ARHVRGWEKP SDHAPVFATF DL