Gene Jann_0411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0411 
SymbolleuS 
ID3932852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp412990 
End bp415581 
Gene Length2592 bp 
Protein Length863 aa 
Translation table11 
GC content62% 
IMG OID637902756 
Productleucyl-tRNA synthetase 
Protein accessionYP_508353 
Protein GI89052902 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCT ACGACCCCTC GATGATCGAG CCGAAATGGC AGAAAGCCTG GGCCGAGGCC 
GGGACATTCA CGGCAAGCAT GGAGGGCAAC AAGCCCAAAT ATTACGTGTT GGAGATGTTC
CCCTATCCGT CGGGCCGCAT CCATATCGGG CACGTGCGCA ACTACACGAT GGGCGATGTC
ATCGCGCGCC ACAAAAAGGC GATGGGCCAC AACGTTCTGC ACCCGATGGG GTTCGATGCC
TTTGGTCTGG CGGCGGAGAA CGCGGCGATG GACCGGGGCA TTCACCCCAA GGACTGGACC
TACAAGAACA TGGACGACAT GCGCGACCAG ATGCGTCCGC TTGGCTTTTC CATCGATTGG
TCCCGCGATC TGGCGACCTG TGACCCGGAC TATTACGGCC AGCAGCAGGC GTTGTTCATC
GACATGATGG AGGCCGGTCT GATCGACCGC AAGAACGCCG TCGTGAACTG GGATCCGGTC
GATATGACGG TGCTGGCCAA TGAGCAGGTG GAAGACGGCA AGGGCTGGCG ATCCGGCGCA
GAGGTGGAGC GCAAGGAACT GACGCAATGG TTCTTCAAGA TCTCCGACTA TTCGGACGAG
CTGCTGGAGG CGCTGGACGG GCTGGACGAC TGGCCCGCCA AGGTGAAGCT GATGCAGGCC
AACTGGATCG GCAAATCGCG CGGGCTGCAA TTTGCATTCG GTCTGGTGGA GCCCGTGGGC
GGCCATGACC GGGTGGACGT CTACACCACG CGCCCCGACA CTCTGTTGGG CGCCAGCTTT
GTAGGGATCT CCCCCGATCA CGCCATCGCC AAGCAATTGG AGAGCGAATC CGAGGACATC
GCCGCCTTCT GTGCCGAATG CCGCAAGGGC GGCACCACAG CGGCAGAGGT TGAGACGGCG
GAAAAGCTGG GATTCGACAC CGGCCTGAAG GTGCGCCACC CCTTCGATAC GGCCGCACAA
TTGCCCGTCT ATATCGCAAA CTTCATCTTG ATGGATTACG GCACCGGCGC GATCTTCGGA
TGTCCCGCCC ATGATGAGCG GGATCTTGAC TTTGCGCGCA AGTACGACTT GCCCGTCGTC
TCCACCTACG TGCCGATTGA CGATGAAGGG CACGTGCTGC CCGAAGACGG TGGTGCCGCC
TATGTGCCAC CAAAGCCCGA CCCGGTGCGC TATATCCGCG GATTCGCCGG CGAAGAAATC
CAATCCGGCA ATGACGCCAT CGACGCTGCT GTCACCTTCT GCGAGGCCGA GGGCGTGGGC
CAAGGCGTCA CCAAGTTCCG CCTGCGCGAT TGGGGCCTGT CGCGCCAACG CTACTGGGGC
TGCCCGATCC CGGTGGTGCA TTGCGACGCC TGCGGGGTGG TGCCTGAAAA GAAAGAAAAC
CTGCCGATTG AGCTGCCCTA TGACGTCACC TTTGATGTCC CCGGCAACCC GCTGGACCGT
CATCCCACAT GGCGCAACAC CCCCTGCCCG TCCTGCGGCG CGCCCGCCCT GCGGGAGACG
GACACGATGG ACACCTTTGT GGACTCAAGC TGGTACTTCG CCCGCTTCAC GGCACCCCAT
GCGGACACGC CGACGTCGAA GGCTGAAGTC GAATACTGGA TGAACGTTGA TCAATATATC
GGCGGCATCG AACACGCGAT CCTGCACCTG CTCTATTCCC GCTTCTTCGC CCGGGCGATG
CACATCACCG GCCACCTGCC CCGCAAGGCG ATTGAGCCGT TCGATGCGCT GTTCACCCAG
GGGATGGTCA CCCACGCGAT CTACAAGACC ACCGACGCCA AGAACCGCCC CGTCTATCAT
TACCCGGAAA CGGTCGATCT GCGCGACGGC GGTGGATATC TGGATGACGG CACAGCGGTG
GAGATCATCC CGTCCGCCAA GATGTCGAAG TCGAAGAACA ACGTCGTCGA CCCCATTGAG
ATCATCAAAC AATACGGCGC GGATACGGCC CGCTGGTTCG TCCTGTCCGA TTCGCCCCCC
GAGCGGGACG TGGAGTGGAC GGCATCGGGC GCGGAAGCGG CCTACAAACA CCTGGGCCGG
GTCTGGGCCC TGTGTGACCG CATCAGCGAA GCTGCGAGGA GCGTCAGCGA GGAGGCGCAG
CCCGCCGCAG GCGAACACGA TACGGCCCTG CTGCGAGAGA TGCACAAAAC CATTCGTGAC
GTCACCAACG GGGTCGATAG TTTCGGCTTC AACGCCGCTA TCGCAAAGCT CTACGCCTTC
ACCAATACGC TGCAAAAGTC CAAGGCGTCG CACAAAGCAC AGCGTGAGGC CGTCATGACC
CTTGCGCAAT TGATGGCCCC GATGACCCCG CATCTGTCTG AAGATATCTG GGCCCATCAA
GGTGGCGACG GCCTGATCGC CGACGCCCCA TGGCCCGTTG CGAATGAGGC GATGTTGGTG
GAATCCACCG TGACCTTGCC GATCCAGATC AACGGCAAAC GCCGCTCGGA AGTGACCGTC
GCCAAGGACG CCAGCAAGGA AGAGGTTGAA AAACGCGCGC TTGCAGACGA CGCTGTGGTC
AGGGCGTTGG ATGGGGCCGC GCCGAAAAAG CTGATCGTTG TCCCCGGACG GATCGTGAAT
GTCGTTATTT AG
 
Protein sequence
MSRYDPSMIE PKWQKAWAEA GTFTASMEGN KPKYYVLEMF PYPSGRIHIG HVRNYTMGDV 
IARHKKAMGH NVLHPMGFDA FGLAAENAAM DRGIHPKDWT YKNMDDMRDQ MRPLGFSIDW
SRDLATCDPD YYGQQQALFI DMMEAGLIDR KNAVVNWDPV DMTVLANEQV EDGKGWRSGA
EVERKELTQW FFKISDYSDE LLEALDGLDD WPAKVKLMQA NWIGKSRGLQ FAFGLVEPVG
GHDRVDVYTT RPDTLLGASF VGISPDHAIA KQLESESEDI AAFCAECRKG GTTAAEVETA
EKLGFDTGLK VRHPFDTAAQ LPVYIANFIL MDYGTGAIFG CPAHDERDLD FARKYDLPVV
STYVPIDDEG HVLPEDGGAA YVPPKPDPVR YIRGFAGEEI QSGNDAIDAA VTFCEAEGVG
QGVTKFRLRD WGLSRQRYWG CPIPVVHCDA CGVVPEKKEN LPIELPYDVT FDVPGNPLDR
HPTWRNTPCP SCGAPALRET DTMDTFVDSS WYFARFTAPH ADTPTSKAEV EYWMNVDQYI
GGIEHAILHL LYSRFFARAM HITGHLPRKA IEPFDALFTQ GMVTHAIYKT TDAKNRPVYH
YPETVDLRDG GGYLDDGTAV EIIPSAKMSK SKNNVVDPIE IIKQYGADTA RWFVLSDSPP
ERDVEWTASG AEAAYKHLGR VWALCDRISE AARSVSEEAQ PAAGEHDTAL LREMHKTIRD
VTNGVDSFGF NAAIAKLYAF TNTLQKSKAS HKAQREAVMT LAQLMAPMTP HLSEDIWAHQ
GGDGLIADAP WPVANEAMLV ESTVTLPIQI NGKRRSEVTV AKDASKEEVE KRALADDAVV
RALDGAAPKK LIVVPGRIVN VVI