Gene Jann_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0397 
Symbol 
ID3932838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp399818 
End bp400501 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content62% 
IMG OID637902742 
ProductDsbA family thiol:disulfide interchange protein 
Protein accessionYP_508339 
Protein GI89052888 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA GAGCCATGTT GTTGGGCGGC GCCACCGGTA TTCTGGGCGC GGGCGCCTAC 
CTGCTGTGGA ACGGCAGAGG CGGTCAGCGT TTTCAGACCG AAGCGCCGCT GACTCCGTTT
ACTGCGGCGA ATGCGCAGGA GGCCACGGAC CTGCCGGACG TGTTGGAGAT GTCGAAAGGC
AACCCCGACA GCGGCGTCAC ACTGATCGAA TATGCGAGCT TCACCTGCCC GCATTGCCGC
AGTTTCCACA CCAATGTCTA TCCGGATCTG AACCGCGACT ATATCGAGCC GGGTCTGATC
AACTTCGTCT ATCGCGAGGT CTACTTTGAC CGCTACGGCC TGTGGGCGGG CATGGTCGCA
CGCTGCGGCG GGCCTCTGCG CTACTTTGGC ATTGTCGATC TGATCTACGC GCAGCAAAGC
GAGTGGACCC AGGGGTCGCC TGCGGAGATT GCCGAAAACC TCAAGCGCAT CGGGCGCGCC
GCGGGCCTGT CCAACGAAGA GCTGGACGCC TGCATGACCG ATGCCGCCAT GGCCGAGGCG
ATGATCGCCA ACTACGAGGC GCAGATGGAA GAGCATCCGA TTGCGGGCAC GCCTGCCTTT
GTCCTCAACG GTGAGATGAG TGGCAACATG AACTACAACG AATTGCGCGG ACGTCTGGAT
GCGGCCATTG AGGCGGCTGG CTGA
 
Protein sequence
MQRRAMLLGG ATGILGAGAY LLWNGRGGQR FQTEAPLTPF TAANAQEATD LPDVLEMSKG 
NPDSGVTLIE YASFTCPHCR SFHTNVYPDL NRDYIEPGLI NFVYREVYFD RYGLWAGMVA
RCGGPLRYFG IVDLIYAQQS EWTQGSPAEI AENLKRIGRA AGLSNEELDA CMTDAAMAEA
MIANYEAQME EHPIAGTPAF VLNGEMSGNM NYNELRGRLD AAIEAAG