| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0378 |
|---|
| Symbol | |
|---|
| ID | 3932819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 383715 |
|---|
| End bp | 384128 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637902723 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_508320 |
|---|
| Protein GI | 89052869 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCGACG ATTATTTAAG ACGTTTCGAC AAGACGGGCC GGGGCCTGGG CCTATCCCTT
GGGCAGGTCG TGGAGGTCGA AAACCGCAAA GGCGGCGGCA TGGCGGCGGA GGCGGATTTG
ATTCGCGCGC GCCTGCCCGG TGGTGTCTTT TGGGTGATGG ATGAACGCGG CGATGTGATG
ACGTCGCCCG GGTTCGCGGA TCGCTTAGGC GCGCAGAGAG ACCGGGGCGC GGGCGATCTG
ACGATGGTTA TCGGCGGGGC GGACGGAATT GACCCCACGC TGAGGGACGA GGCGGGGATG
GCGATTTCCT TCGGCAAGAT GGTCTGGCCG CATATGCTGG CGCGGGTCAT GCTGAGTGAG
CAATTGTACC GGGCCGCGTC TATTCTGGCG GGCGGCCCGT ATCACCGGGT CTAG
|
|---|
| Protein sequence | MIDDYLRRFD KTGRGLGLSL GQVVEVENRK GGGMAAEADL IRARLPGGVF WVMDERGDVM
TSPGFADRLG AQRDRGAGDL TMVIGGADGI DPTLRDEAGM AISFGKMVWP HMLARVMLSE
QLYRAASILA GGPYHRV
|
|---|
| |