| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0370 |
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| Symbol | cobD |
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| ID | 3932811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 372829 |
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| End bp | 373788 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637902715 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_508312 |
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| Protein GI | 89052861 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.527036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCGCCA CCGCTGGGTT GCTGTTTGCT GCGATGATCC TGGATGCGCT GGTGGGCGAG
CCCCGGTGGC TGTGGTCCCG GATCCCGCAT CCGATCGTGC TGATGGGGCG GTTGATCGAC
TGGTGCGATG CCACGTTCAA TCGCGGGGCG CAGCGGCTCA ACGGGGGTCT GGTCATGGCA
GCACTTGGCC TGAGCGCATT GGGGTTGGGT TGGGTCATTG CCGCCCTGCC GCTCGGGTGG
CTGTGGCAAA TCCTGATCGC CGCGGTTTTG CTGGCGCAGA GGTCTTTGGT GGACCATGTG
GCGGCGGTCG CTGTCGGTCT CCGCCGGTCG CTGGCGGACG GCAAGCGCGC CGTTGCGATG
ATCGTCGGGC GCGACACCGG GCCATTGGAT GACGCCGCCG TGGCCCGCGC CGCGATTGAG
AGTGCGGCAG AGAACATGTC CGATGGTGTC GTCGCGCCCG CATTCTGGTT TCTGGTCGGC
GGGCTGCCCG GGTTATTGTT GTATAAGATC ACGAACACGG CGGATTCGAT GATCGGCCAT
CGCACGCCCC GGCACGAGGC CTTCGGATGG GCGGCGGCGC GGTTCGATGA CGTGTTGAAC
TATGTCCCCG CGCGGCTGAC GGCCTTGTTG ATCGCACTCA CCCACGGGTT TGACGCGCTG
CGCTGTGCCT ATCGCGACGG TCCCAAACAT CGGTCGGTGA ATGCGGGCTG GCCGGAGGCG
GCGATGGCCT CCGCCCTCGG TCTGTCCTTG TCGGGCTCGC GCGCCTATGG CGGGGAGATG
ACAGAGGATC CGGCCCTGAA CGCGACCGGG TCACGCGATG CCACCCCCGG CGATATAAAA
GCGGCGATCC GCGTTCTGTG GCGCGTCTGG TGGGCGATGC TTGGCGGCAG CGTCATCTGC
ATCCTTCTCG GCGGGTGGGG GGCGCTGCTT CTTGCCACGG TTTTGCTTGC GCTCATCTGA
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| Protein sequence | MIATAGLLFA AMILDALVGE PRWLWSRIPH PIVLMGRLID WCDATFNRGA QRLNGGLVMA
ALGLSALGLG WVIAALPLGW LWQILIAAVL LAQRSLVDHV AAVAVGLRRS LADGKRAVAM
IVGRDTGPLD DAAVARAAIE SAAENMSDGV VAPAFWFLVG GLPGLLLYKI TNTADSMIGH
RTPRHEAFGW AAARFDDVLN YVPARLTALL IALTHGFDAL RCAYRDGPKH RSVNAGWPEA
AMASALGLSL SGSRAYGGEM TEDPALNATG SRDATPGDIK AAIRVLWRVW WAMLGGSVIC
ILLGGWGALL LATVLLALI
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