Gene Jann_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0315 
Symbol 
ID3932754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp322151 
End bp322948 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID637902659 
Producthypothetical protein 
Protein accessionYP_508257 
Protein GI89052806 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATG ATTTCATGAC CCGCGCGACC CTCGCCGGCG TCGGTGTGGC CATCGCGGCG 
GCTCCCCTTG GGTGCTTCGT TGTCTGGCGC CGCATGGCGT ATTTTGGTGA CGCCACAGCC
CATGCGGCGA TCCTGGGCGT CGCGCTGTCG CTGGCCCTTC AGATGTCCAT CTTCGTCGGC
GCGGTTGTGG TTGCGCTGGT CATGGCACTG ACCGTCACGG CCCTGACGGG GCGGGGCTAT
GCAATGGACA CTCTTTTGGG CGTGATGGCC CACTCTGCCC TTGCGTTCGG GCTGGTTGCC
GTGTCGTTCC TGTCCGGCAT CCGGATTGAC CTTATGGCCT ATCTGTTCGG CGATATCCTG
GCCGTGTCAC GCCTTGATCT GCTTGTTATC TGGGGTGGCG CGGCTCTGGT CGTGGCGCTG
ATCGCGTGGC GATGGTCCCC GCTTCTGACG TCAACGTTGA ACGAAGAACT GGCCTATGCC
AGCAGCATTG ACCCCAAGCG TGAGCAGTTG ATCCTGACAC TTGCCCTGGC GATCACGGTT
GCTGTCGCGA TCAAGGTCGT CGGTGTCCTT TTGATTGCGG CGATGCTGAT CATTCCGGCG
GCTGCCGCGC GGAGCTTTGC CCGCACACCG GAGGCCATGG CCGTGATTGC GGCCCTAATC
GGTGGCCTGT CCGCCGTGGT GGGCCTGCGT GCGGCGTATG TTTTCGATAC GCCCGCCGGC
CCCTCCATCG TGTGCGTTGC TGCAATCGTC TTCGCCGCGT TCAGCGTGAT CGGTTGGCGA
AGGCGCGACG GGGCATAG
 
Protein sequence
MFDDFMTRAT LAGVGVAIAA APLGCFVVWR RMAYFGDATA HAAILGVALS LALQMSIFVG 
AVVVALVMAL TVTALTGRGY AMDTLLGVMA HSALAFGLVA VSFLSGIRID LMAYLFGDIL
AVSRLDLLVI WGGAALVVAL IAWRWSPLLT STLNEELAYA SSIDPKREQL ILTLALAITV
AVAIKVVGVL LIAAMLIIPA AAARSFARTP EAMAVIAALI GGLSAVVGLR AAYVFDTPAG
PSIVCVAAIV FAAFSVIGWR RRDGA